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L1_007_122G1_scaffold_618

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_618_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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372..1322
DNA (951bp) protein (317aa)
Pseudouridine synthase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXZ2_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:KJF41277.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
RluA family pseudouridine synthase
L1_007_122G1_scaffold_618_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1436..2035)
DNA (600bp) protein (200aa)
Small primase-like proteins (Toprim domain) (EC:3.1.26.8)
Ribonuclease M5 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY9_9FIRM
Ribonuclease M5 {ECO:0000313|EMBL:KJF41276.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_618_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2032..3066)
DNA (1035bp) protein (345aa)
DNA polymerase III, delta subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY8_9FIRM
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EHL65193.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
DNA polymerase III, delta subunit
L1_007_122G1_scaffold_618_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3057..5150)
DNA (2094bp) protein (698aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65192.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ComEC/Rec2-related protein
L1_007_122G1_scaffold_618_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5157..5696)
DNA (540bp) protein (180aa)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65191.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_618_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5733..6074)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65190.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
histidine triad (HIT) protein
L1_007_122G1_scaffold_618_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6166..8832)
DNA (2667bp) protein (889aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY4_9FIRM
L1_007_122G1_scaffold_618_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9183..10793)
DNA (1611bp) protein (537aa)
Cell division protein FtsI/penicillin-binding protein 2 (EC:2.4.1.129)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65188.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_618_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10953..11246)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65187.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_618_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11350..12567)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65186.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
SARP family transcriptional regulator
L1_007_122G1_scaffold_618_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12599..13663)
DNA (1065bp) protein (355aa)
Twitching motility protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY0_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EHL65185.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
pilus retraction protein PilT
L1_007_122G1_scaffold_618_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13674..14105)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65184.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_618_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14130..14564)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65183.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_618_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14557..15036)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65182.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_618_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15081..15413)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65181.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_618_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15426..16469)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX5_9FIRM
Type II secretion system protein {ECO:0000313|EMBL:KJF41265.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
HofF; general secretory pathway protein F
L1_007_122G1_scaffold_618_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16482..17771)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65179.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying 17 items

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