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L1_007_122G1_scaffold_629

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_629_1
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1045
DNA (1044bp) protein (348aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XVZ5_9FIRM
L1_007_122G1_scaffold_629_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1127..2005
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42434.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L1_007_122G1_scaffold_629_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2035..2568
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L719_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68807.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_122G1_scaffold_629_4
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2676..3392
DNA (717bp) protein (239aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N114_9FIRM
L1_007_122G1_scaffold_629_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3427..3897
DNA (471bp) protein (157aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium sp. CAG:58 RepID=R6SSD9_9CLOT
ybaK/ebsC protein
L1_007_122G1_scaffold_629_6
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4106..4612)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XKP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12994.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hypothetical protein
L1_007_122G1_scaffold_629_7
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4678..5814)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XDQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12995.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hypothetical protein
L1_007_122G1_scaffold_629_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6013..6867)
DNA (855bp) protein (285aa)
EDD domain protein DegV family n=1 Tax=Clostridium sp. CAG:217 RepID=R6IXL9_9CLOT
EDD domain protein DegV family {ECO:0000313|EMBL:CDB51194.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L1_007_122G1_scaffold_629_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6929..7924)
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
dus1; putative tRNA-dihydrouridine synthase 1 (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NAP4_9CLOT
L1_007_122G1_scaffold_629_10
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8375..8641
DNA (267bp) protein (89aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F5W8_DESDL
AbrB family DNA-binding protein
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:AGA69229.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_007_122G1_scaffold_629_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8662..11073)
DNA (2412bp) protein (804aa)
Glycoside hydrolase family 31 n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPZ8_9CLOT
Glycoside hydrolase family 31 {ECO:0000313|EMBL:CCY68848.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
alpha-xylosidase
L1_007_122G1_scaffold_629_12
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11088..12377)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Paenibacillus larvae RepID=UPI0001F85DCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETK26466.1}; TaxID=697286 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25719.;"
L1_007_122G1_scaffold_629_13
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12416..13714)
DNA (1299bp) protein (433aa)
MiaB-like protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DS50_9FIRM
MiaB-like protein {ECO:0000313|EMBL:CDA91288.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
MiaB-like tRNA modifying enzyme
L1_007_122G1_scaffold_629_14
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13881..14555)
DNA (675bp) protein (225aa)
Mg2+ transporter-C (MgtC) family protein n=2 Tax=Bilophila RepID=E5Y5G7_BILWA
Mg2+ transporter-C (MgtC) family protein {ECO:0000313|EMBL:EFV44692.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
Mg2+ transporter
L1_007_122G1_scaffold_629_15
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14805..15692
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Z0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61895.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
cynR2; HTH-type transcriptional regulator CynR
L1_007_122G1_scaffold_629_16
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16143..17096)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KR65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67529.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
nucleotide pyrophosphatase-like protein
L1_007_122G1_scaffold_629_17
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17180..17485)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30833.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L1_007_122G1_scaffold_629_18
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17507..17779)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KDQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44610.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Predicted transcriptional regulator
Displaying 18 items

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