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L1_007_122G1_scaffold_661

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_661_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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447..1499
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75204.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
G5 domain-containing protein
L1_007_122G1_scaffold_661_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1571..1873)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75205.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_661_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1925..2788
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75206.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_122G1_scaffold_661_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2790..4214
DNA (1425bp) protein (475aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39021.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
membrane-fusion protein
L1_007_122G1_scaffold_661_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4227..5432
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75208.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type antimicrobial peptide transport system, permease component
L1_007_122G1_scaffold_661_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5700..8621
DNA (2922bp) protein (974aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV1_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EHL75209.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_661_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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8674..10044
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV2_9FIRM
2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:KJF39019.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_661_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10152..11066)
DNA (915bp) protein (305aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
2-dehydropantoate 2-reductase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV3_9FIRM
hypothetical protein
L1_007_122G1_scaffold_661_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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11440..12660
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39017.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
major facilitator superfamily protein
L1_007_122G1_scaffold_661_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12958..14400)
DNA (1443bp) protein (481aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9W6_9FIRM
Phage integrase family.
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDP22125.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_122G1_scaffold_661_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14403..14600)
DNA (198bp) protein (66aa)
Excisionase family DNA binding domain-containing protein n=3 Tax=Firmicutes RepID=F4XGN3_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERI81600.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_122G1_scaffold_661_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14970..15473)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72393.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_661_13
unknown

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comp(15470..15736)
DNA (267bp) protein (89aa)

This feature has no annotations

L1_007_122G1_scaffold_661_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16282..16908
DNA (627bp) protein (209aa)
SrtB family sortase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW1_9FIRM
SrtB family sortase {ECO:0000313|EMBL:EHL66309.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying 14 items

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