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L1_007_122G1_scaffold_672

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_672_1
unknown

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1..147
DNA (147bp) protein (49aa)

This feature has no annotations

L1_007_122G1_scaffold_672_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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399..710
DNA (312bp) protein (104aa)
Prevent-host-death family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRD7_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EHL72487.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
prevent-host-death family protein
L1_007_122G1_scaffold_672_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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703..1029
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRD8_9FIRM
Toxin RelE {ECO:0000313|EMBL:KJF39988.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_672_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1107..1424)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRD9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:KJF39987.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Predicted transcriptional regulator
L1_007_122G1_scaffold_672_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1421..1783)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE0_9FIRM
Toxin RelE {ECO:0000313|EMBL:KJF39986.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Protein of unknown function (DUF1044).
L1_007_122G1_scaffold_672_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1780..2784)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72491.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
parB; chromosome partitioning protein ParB
L1_007_122G1_scaffold_672_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2765..3586)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72492.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
chromosome partitioning ATPase
L1_007_122G1_scaffold_672_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4220..4459
DNA (240bp) protein (80aa)
Transposase for insertion sequence element IS200 n=2 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNV5_9FIRM
Transposase for insertion sequence element IS200 {ECO:0000313|EMBL:EHL75213.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transposase
L1_007_122G1_scaffold_672_9
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4801..5091)
DNA (291bp) protein (97aa)
DNA-binding protein HBsu n=1 Tax=Lactobacillus salivarius NIAS840 RepID=F5VFK1_9LACO
DNA-binding protein HU
DNA-binding protein HBsu {ECO:0000313|EMBL:EGL99547.1}; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
L1_007_122G1_scaffold_672_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5115..5885)
DNA (771bp) protein (257aa)
SrtB family sortase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW1_9FIRM
SrtB family sortase {ECO:0000313|EMBL:EHL66309.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
sortase
L1_007_122G1_scaffold_672_11
Prevotella sp. BV3P1, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5954..7906)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Prevotella sp. BV3P1 RepID=U7URU5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERT61158.1}; TaxID=1111130 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. BV3P1.;"
leucine Rich repeat protein
L1_007_122G1_scaffold_672_12
unknown

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comp(8026..8457)
DNA (432bp) protein (144aa)

This feature has no annotations

L1_007_122G1_scaffold_672_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8547..8774)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF39016.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_672_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8762..8956)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF39016.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_672_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8985..9482)
DNA (498bp) protein (166aa)
Rrf2 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJA4_9FIRM
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:EXG85324.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
rrf2 family protein (putative transcriptional regulator)
L1_007_122G1_scaffold_672_16
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9720..10307
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B35551
Putative transcriptional regulator {ECO:0000313|EMBL:EPY13581.1}; TaxID=1117109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei A6-6i-x.;"
hypothetical protein
L1_007_122G1_scaffold_672_17
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10955..11587)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAU8_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO30324.1}; TaxID=556269 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes OXCC13.;"
hypothetical protein
L1_007_122G1_scaffold_672_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11574..12404)
DNA (831bp) protein (277aa)
ABC 3 transport family protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAU7_OXAFO
ABC transporter {ECO:0000313|EMBL:KJF39014.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC transporter permease
L1_007_122G1_scaffold_672_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12397..13107)
DNA (711bp) protein (237aa)
Phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter, ATP-binding protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAU6_OXAFO
ABC transporter {ECO:0000313|EMBL:KJF39013.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_672_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13173..14690)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AMZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF39012.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
YodA domain-containing protein
L1_007_122G1_scaffold_672_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14807..15106)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Y048_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF39041.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_672_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15140..15676)
DNA (537bp) protein (179aa)
Transcriptional regulator, Fur family n=1 Tax=Clostridium sp. M62/1 RepID=D4CI08_9CLOT
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:KJF39040.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Fe2+/Zn2+ uptake regulation proteins
Displaying 22 items

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