ggKbase home page

L1_007_122G1_scaffold_675

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_675_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..906)
DNA (906bp) protein (302aa)
O-acetylhomoserine sulfhydrylase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2X7_BIFBR
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ERI86393.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_675_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1485..2216
DNA (732bp) protein (244aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=S2ZK18_BIFBR
Pyridoxine kinase
L1_007_122G1_scaffold_675_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2316..2543)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00036FD9F9
Uncharacterized protein {ECO:0000313|EMBL:ERI86395.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_007_122G1_scaffold_675_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2748..3014
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BNY2_BIFBR
Transposase
Uncharacterized protein {ECO:0000313|EMBL:EPD74694.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_675_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3232..3606
DNA (375bp) protein (125aa)
UPF0102 protein BIFBRE_03788 n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNY0_BIFBR
Endonuclease
UPF0102 protein BBBR_0773 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_675_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3621..5156
DNA (1536bp) protein (512aa)
Mg chelatase-like protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2Y1_BIFBR
magnesium chelatase subunit ChlI-like ATPase
Mg chelatase-like protein {ECO:0000313|EMBL:EFE89366.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99810.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_675_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5153..6772
DNA (1620bp) protein (540aa)
DNA protecting protein DprA n=3 Tax=Bifidobacterium breve RepID=S2ZE92_BIFBR
Smf protein {ECO:0000313|EMBL:AHJ19074.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Smf protein
L1_007_122G1_scaffold_675_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6835..8736
DNA (1902bp) protein (634aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=4 Tax=Bifidobacterium breve RepID=D4BNX7_BIFBR
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:BAQ99808.1}; Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EFE89364.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
L1_007_122G1_scaffold_675_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8809..9759
DNA (951bp) protein (317aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=3 Tax=Bifidobacterium breve RepID=F6C9Z6_BIFBA
Succinate dehydrogenase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EFE89363.1}; Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:BAQ99807.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_675_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9822..10487
DNA (666bp) protein (222aa)
O-methyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C9Z7_BIFBA
Caffeoyl-CoA O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:AEF28071.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_675_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10528..11430)
DNA (903bp) protein (301aa)
Lysine decarboxylase family n=4 Tax=Bifidobacterium breve RepID=F9XYN3_BIFBU
Lysine decarboxylase family
TIGR00730 family protein {ECO:0000313|EMBL:EFE89361.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99805.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_675_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11469..12857)
DNA (1389bp) protein (463aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Bifidobacterium breve RepID=D4BNX3_BIFBR
Na/H antiporter nhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_675_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12937..14142)
DNA (1206bp) protein (402aa)
Putative hemolysin n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXD4_BIFBR
Cystathionine beta-lyase
Putative hemolysin {ECO:0000313|EMBL:ERI86307.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_675_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14535..15896)
DNA (1362bp) protein (454aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=5 Tax=Bifidobacterium breve RepID=F9XYN0_BIFBU
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_675_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16070..16753)
DNA (684bp) protein (228aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNX0_BIFBR
ATP-dependent Clp protease proteolytic subunit
L1_007_122G1_scaffold_675_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16759..17277)
DNA (519bp) protein (173aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
ATP-dependent Clp protease proteolytic subunit n=7 Tax=Bifidobacterium breve RepID=F9XYM8_BIFBU
ATP-dependent Clp protease proteolytic subunit
L1_007_122G1_scaffold_675_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17432..17809)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6CA04_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20974.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_675_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17854..19254)
DNA (1401bp) protein (467aa)
Chloride transporter, chloride channel family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2Z3_BIFBR
Chloride channel protein
Chloride transporter, ClC family {ECO:0000313|EMBL:ERI86312.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_675_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19438..20811)
DNA (1374bp) protein (458aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Trigger factor n=3 Tax=Bifidobacterium breve RepID=F9XYM5_BIFBU
Trigger factor, ppiase
L1_007_122G1_scaffold_675_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20808..22052)
DNA (1245bp) protein (415aa)
Ribonuclease D (EC:3.1.26.3)
Ribonuclease D {ECO:0000313|EMBL:ABE95475.1}; EC=3.1.26.3 {ECO:0000313|EMBL:ABE95475.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribonuclease D n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYM4_BIFBU
L1_007_122G1_scaffold_675_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22049..22681)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYM3_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95474.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_675_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22864..23745)
DNA (882bp) protein (294aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Pyruvate formate-lyase 1-activating enzyme n=6 Tax=Bifidobacterium breve RepID=F6CA09_BIFBA
Pyruvate formate-lyase activating enzyme
L1_007_122G1_scaffold_675_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23858..24052)
DNA (195bp) protein (65aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=2 Tax=Bifidobacterium breve RepID=F6CA10_BIFBA
Formate acetyltransferase {ECO:0000313|EMBL:KEY32759.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Displaying 23 items

View Taxonomy