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L1_007_122G1_scaffold_686

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_686_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..184
DNA (183bp) protein (61aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EFE88383.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EFE88383.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
UDP-galactopyranose mutase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQ88_BIFBR
UDP-galactopyranose mutase
L1_007_122G1_scaffold_686_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(292..1227)
DNA (936bp) protein (312aa)
Hypothetical secreted protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ70_BIFBU
putative secreted protein
Hypothetical secreted protein {ECO:0000313|EMBL:ABE96450.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_686_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1380..2105
DNA (726bp) protein (242aa)
membrane protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E07B46
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ21982.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_686_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2195..3016
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIA7_BIFBR
Fumarylacetoacetate hydrolase family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76126.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_686_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3059..3988)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZP28_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76125.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Permease
L1_007_122G1_scaffold_686_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4548..5771
DNA (1224bp) protein (408aa)
ATP-dependent chaperone protein ClpB n=2 Tax=Bifidobacterium breve RepID=D4BQ93_BIFBR
ClpB protein
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_686_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5803..6678
DNA (876bp) protein (292aa)
protein disaggregation chaperone n=1 Tax=Bifidobacterium breve RepID=UPI0003160F6D
ClpB protein
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_686_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7146..8243
DNA (1098bp) protein (366aa)
Glutamyl-tRNA synthetase n=2 Tax=Bifidobacterium breve RepID=F9XZ65_BIFBU
Putative tRNA synthase {ECO:0000313|EMBL:BAR00825.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Glutamyl-tRNA synthetase
L1_007_122G1_scaffold_686_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8269..9378
DNA (1110bp) protein (370aa)
Glycerophosphodiester phosphodiesterase family protein n=2 Tax=Bifidobacterium breve RepID=H3L100_BIFBR
Glycerophosphoryl diester phosphodiesterase
Uncharacterized protein {ECO:0000313|EMBL:EPD76121.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_686_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9421..9900)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Ribosomal RNA large subunit methyltransferase H n=4 Tax=Bifidobacterium breve RepID=F6C8E4_BIFBA
Hypothetical protein
L1_007_122G1_scaffold_686_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10137..10874)
DNA (738bp) protein (246aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQ97_BIFBR
L1_007_122G1_scaffold_686_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11131..12153)
DNA (1023bp) protein (341aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium breve RepID=D4BQ98_BIFBR
Transcriptional regulator, lacI type
Transcriptional regulator, lacI type {ECO:0000313|EMBL:AHJ21974.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_686_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12488..13714
DNA (1227bp) protein (409aa)
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z6_BIFBR
Solute-binding protein of ABC transporter system for sugars
Solute-binding protein of ABC transporter system for sugars {ECO:0000313|EMBL:AHJ21973.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_686_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13837..15066
DNA (1230bp) protein (410aa)
Putative ABC-type sugar transport system, permease component n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z5_BIFBR
Transporter
Transporter {ECO:0000313|EMBL:AHJ21972.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_686_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15068..15952
DNA (885bp) protein (295aa)
Sugar ABC transporter, permease protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z4_BIFBR
Glucose transport system permease protein
Glucose transport system permease protein {ECO:0000313|EMBL:AHJ21971.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_686_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16004..18028
DNA (2025bp) protein (675aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQA2_BIFBR
Hypothetical protein (possible glycogen debranching enzyme)
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:EFE88397.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_686_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18883..19557)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S2ZI96_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76116.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_686_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19694..21109)
DNA (1416bp) protein (472aa)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium breve RepID=D4BQA5_BIFBR
Phosphohydrolase (MutT/nudix family protein)
Uncharacterized protein {ECO:0000313|EMBL:BAR00815.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_686_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21264..21548)
DNA (285bp) protein (95aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Polyphosphate kinase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Y9_BIFBR
Polyphosphate kinase
Displaying 19 items

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