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L1_007_122G1_scaffold_687

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_687_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..81)
-----------------
DNA (81bp)
protein (27aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66307.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_687_2
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(98..1510)
-----------------
DNA (1413bp)
protein (471aa)
uxaC; uronate isomerase UxaC (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Uronate isomerase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQK5_CLOSH
L1_007_122G1_scaffold_687_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1491..2576)
-----------------
DNA (1086bp)
protein (362aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39496.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
transcriptional regulator
L1_007_122G1_scaffold_687_4
unknown

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comp(2942..3094)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

L1_007_122G1_scaffold_687_5
RLO_RIF05_58_11, RIF5, Bacteria

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3596..4855
-----------------
DNA (1260bp)
protein (420aa)
Putative metal-dependent hydrolase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YNA6_9MICO
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
L1_007_122G1_scaffold_687_6
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5041..6072
-----------------
DNA (1032bp)
protein (344aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMJ5_CLOPH
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABX41440.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_122G1_scaffold_687_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6310..7713
-----------------
DNA (1404bp)
protein (468aa)
Multiple sugar transport system substrate-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KAH5_9FIRM
Multiple sugar transport system substrate-binding protein {ECO:0000313|EMBL:EGN40410.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter substrate-binding protein
L1_007_122G1_scaffold_687_8
Solibacillus silvestris, Solibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7799..8722
-----------------
DNA (924bp)
protein (308aa)
ABC-type sugar transport systems, permease component n=1 Tax=Solibacillus silvestris (strain StLB046) RepID=F2F9Q2_SOLSS
sugar ABC transporter permease
ABC-type sugar transport systems, permease component {ECO:0000313|EMBL:BAK15022.1}; TaxID=1002809 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Solibacillus.;" source="Solibacillus silvestris (strain StLB046) (Bacillus silvestris).;"
L1_007_122G1_scaffold_687_9
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8712..9581
-----------------
DNA (870bp)
protein (290aa)
sugar ABC transporter permease n=1 Tax=Paenibacillus elgii RepID=UPI000248D676
ABC transporter
ABC transporter {ECO:0000313|EMBL:AIQ75743.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
L1_007_122G1_scaffold_687_10
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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9601..10668
-----------------
DNA (1068bp)
protein (356aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI0003727128
hypothetical protein
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
L1_007_122G1_scaffold_687_11
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10709..11878
-----------------
DNA (1170bp)
protein (390aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V9W8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF10982.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
L1_007_122G1_scaffold_687_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11967..13073
-----------------
DNA (1107bp)
protein (369aa)
Glycosyl hydrolase, family 88 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BLD9_9CLOT
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:ERI73045.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
glycosyl hydrolase family 88
L1_007_122G1_scaffold_687_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13092..14378
-----------------
DNA (1287bp)
protein (429aa)
Oxidoreductase n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KL90_ACHPJ
Putative dehydrogenase {ECO:0000313|EMBL:EXG86706.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Oxidoreductase
L1_007_122G1_scaffold_687_14
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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14375..15553
-----------------
DNA (1179bp)
protein (393aa)
Peptidase C69 family n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CW95_9FIRM
Peptidase C69 family {ECO:0000313|EMBL:CCX72143.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
Displaying 14 items

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