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L1_007_122G1_scaffold_688

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_688_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(391..1416)
DNA (1026bp) protein (342aa)
Site-specific recombinase, phage integrase family n=4 Tax=Escherichia coli RepID=D7Y790_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW01981.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
phage integrase family site specific recombinase
L1_007_122G1_scaffold_688_2
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1966..2793
DNA (828bp) protein (276aa)
Inner membrane symporter yicJ n=3 Tax=Escherichia coli RepID=L3BZT7_ECOLX
transporter
Putative permease {ECO:0000313|EMBL:AAZ90291.1}; TaxID=300269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei (strain Ss046).;"
L1_007_122G1_scaffold_688_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2756..3349
DNA (594bp) protein (198aa)
Inner membrane symporter yicJ n=6 Tax=Escherichia coli RepID=M8TTP0_ECOLX
yicJ; putative transporter
Transporter {ECO:0000313|EMBL:EZD88860.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L1_007_122G1_scaffold_688_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3359..5677
DNA (2319bp) protein (773aa)
Alpha-xylosidase n=116 Tax=Enterobacteriaceae RepID=XYLS_ECOLI
glycoside hydrolase family protein
Alpha-xylosidase {ECO:0000313|EMBL:EOV74661.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L1_007_122G1_scaffold_688_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5730..7439)
DNA (1710bp) protein (570aa)
AsmA family protein n=39 Tax=Escherichia coli RepID=A8A6B7_ECOHS
yicH; AsmA family protein
AsmA family protein {ECO:0000313|EMBL:AFG42602.1}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P12b.;"
L1_007_122G1_scaffold_688_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7560..8951)
DNA (1392bp) protein (464aa)
Xanthine permease XanP n=1200 Tax=root RepID=XANP_ECO57
yicE; Putative xanthine permease
Uracil-xanthine permease family protein {ECO:0000313|EMBL:EZK18162.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L1_007_122G1_scaffold_688_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9231..10436
DNA (1206bp) protein (402aa)
Sodium/glutamate symporter n=4 Tax=Escherichia coli RepID=D7Y797_ECOLX
Sodium/glutamate symporter {ECO:0000313|EMBL:EFJ96442.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
sodium/glutamate symporter
L1_007_122G1_scaffold_688_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10602..12683)
DNA (2082bp) protein (694aa)
ATP-dependent DNA helicase RecG n=6 Tax=Escherichia coli RepID=D7Y798_ECOLX
ATP-dependent DNA helicase recG {ECO:0000313|EMBL:EOW01975.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
recG; ATP-dependent DNA helicase RecG
L1_007_122G1_scaffold_688_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12689..13345)
DNA (657bp) protein (219aa)
spoU; tRNA (guanosine-2'-O-)-methyltransferase (EC:2.1.1.34)
tRNA guanosine-2'-O-methyltransferase n=385 Tax=Escherichia RepID=E2QH06_ECOLX
SpoU protein; tRNA (Guanosine-2'-O-)-methyltransferase {ECO:0000313|EMBL:CDN84408.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L1_007_122G1_scaffold_688_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13385..15493)
DNA (2109bp) protein (703aa)
Bifunctional (P)ppGpp synthase/hydrolase SpoT {ECO:0000313|EMBL:KDY58936.1}; EC=3.1.7.2 {ECO:0000313|EMBL:KDY58936.1};; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase n=926 Tax=Enterobacteriaceae RepID=SPOT_ECO57
spoT; bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
L1_007_122G1_scaffold_688_11
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15512..15745)
DNA (234bp) protein (78aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1348563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Namur str. 05-2929.;"
DNA-directed RNA polymerase subunit omega n=2 Tax=Enterobacteriaceae RepID=R9VRZ0_9ENTR
Displaying 11 items

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