ggKbase home page

L1_007_122G1_scaffold_694

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_694_1
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..250)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IU76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22512.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L1_007_122G1_scaffold_694_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(862..2154)
DNA (1293bp) protein (431aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CBL26322.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CBL26322.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Diaminopimelate decarboxylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M510_9FIRM
L1_007_122G1_scaffold_694_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2154..2837)
DNA (684bp) protein (228aa)
Sugar-specific transcriptional regulator TrmB superfamily n=1 Tax=Clostridium sp. D5 RepID=F0Z4K0_9CLOT
Sugar-specific transcriptional regulator TrmB superfamily {ECO:0000313|EMBL:EGB91016.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted transcriptional regulators
L1_007_122G1_scaffold_694_4
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2972..4423)
DNA (1452bp) protein (484aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3Y4_9CLOT
L1_007_122G1_scaffold_694_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4456..5358)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73141.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_122G1_scaffold_694_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5542..9807
DNA (4266bp) protein (1422aa)
Putative CoA-substrate-specific enzyme activase n=2 Tax=Coprococcus RepID=C0B5E6_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDB85678.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
CoA-substrate-specific enzyme activase, putative
L1_007_122G1_scaffold_694_7
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10002..11291)
DNA (1290bp) protein (430aa)
Aminotransferase class I/II n=1 Tax=Dorea sp. CAG:317 RepID=R6WC48_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDD06950.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
transcriptional regulator
L1_007_122G1_scaffold_694_8
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11571..13112)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9K1_9FIRM
L1_007_122G1_scaffold_694_9
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(13228..14265)
DNA (1038bp) protein (346aa)
LacI family transcriptional regulator n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZV3_9FIRM
transcriptional regulator
Tax=GWC1_Treponema_61_84_curated
L1_007_122G1_scaffold_694_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14610..15500)
DNA (891bp) protein (297aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B8J7_9CLOT
Displaying 10 items

View Taxonomy