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L1_007_122G1_scaffold_714

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_714_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..235
DNA (234bp) protein (78aa)
DNA-damage-inducible protein J n=6 Tax=Bifidobacterium RepID=B3DQW5_BIFLD
RelB antitoxin
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EEI79787.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_122G1_scaffold_714_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

235..726
DNA (492bp) protein (164aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=Q8G4I3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25198.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_714_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(778..2547)
DNA (1770bp) protein (590aa)
PF03235 family protein n=3 Tax=Bifidobacterium longum RepID=I3BH71_BIFLN
hypothetical protein
PF03235 family protein {ECO:0000313|EMBL:EIJ30714.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_122G1_scaffold_714_4
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2731..3372)
DNA (642bp) protein (214aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=Q8G4I1_BIFLO
argA; arga
Uncharacterized protein {ECO:0000313|EMBL:CCY95378.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_122G1_scaffold_714_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3412..4170)
DNA (759bp) protein (253aa)
Response regulator receiver domain protein n=3 Tax=Bifidobacterium RepID=C2GYG6_BIFLN
Response regulator receiver domain protein {ECO:0000313|EMBL:EEI79791.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
response regulator
L1_007_122G1_scaffold_714_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4172..5434)
DNA (1263bp) protein (421aa)
Atypical histidine kinase sensor of two-component system n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4H9_BIFLO
atypical histidine kinase sensor of two-component system
Uncharacterized protein {ECO:0000313|EMBL:EEQ55574.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_122G1_scaffold_714_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5739..6584
DNA (846bp) protein (282aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G4H8_BIFLO
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AIW43888.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_714_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6765..7664
DNA (900bp) protein (300aa)
Integral Membrane protein n=13 Tax=Bifidobacterium longum RepID=E4R2D2_BIFLM
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY25547.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_122G1_scaffold_714_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7780..8820
DNA (1041bp) protein (347aa)
EamA-like transporter family protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BHD6_BIFLN
EamA-like transporter family protein {ECO:0000313|EMBL:EIJ30779.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L1_007_122G1_scaffold_714_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8853..9695)
DNA (843bp) protein (281aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=Q8G4H5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25206.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_714_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9725..11179
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=10 Tax=Bifidobacterium RepID=MIAB_BIFLD
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
L1_007_122G1_scaffold_714_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11190..12176
DNA (987bp) protein (329aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
tRNA dimethylallyltransferase n=13 Tax=Bifidobacterium RepID=MIAA_BIFLD
tRNA delta(2)-isopentenylpyrophosphate transferase
L1_007_122G1_scaffold_714_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12210..12938)
DNA (729bp) protein (243aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=Q8CY48_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44795.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_714_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13171..16080
DNA (2910bp) protein (970aa)
FtsK/SpoIIIE family protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GYH5_BIFLN
Cell division protein FtsK {ECO:0000313|EMBL:KEY31412.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
cell division protein FtsK
L1_007_122G1_scaffold_714_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16257..16892
DNA (636bp) protein (212aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEI79801.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EEI79801.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=4 Tax=Bifidobacterium longum subsp. longum RepID=F8APP5_BIFLN
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L1_007_122G1_scaffold_714_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16945..17268
DNA (324bp) protein (108aa)
CinA n=7 Tax=Bifidobacterium RepID=E4R2E0_BIFLM
Cina {ECO:0000313|EMBL:KFI71099.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
cinA; cina
L1_007_122G1_scaffold_714_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17328..17843
DNA (516bp) protein (172aa)
Possible DNA binding protein n=15 Tax=Bifidobacterium RepID=Q8G4H0_BIFLO
Helix-turn-helix.
XRE family transcriptional regulator {ECO:0000313|EMBL:KEY31409.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_122G1_scaffold_714_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17955..18188
DNA (234bp) protein (78aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B7GQG7_BIFLS
Protein of unknown function (DUF3046).
Uncharacterized protein {ECO:0000313|EMBL:CBK70359.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_122G1_scaffold_714_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18489..19682
DNA (1194bp) protein (398aa)
Protein RecA n=13 Tax=Bifidobacterium RepID=RECA_BIFLO
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_714_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19685..20278
DNA (594bp) protein (198aa)
RecX-like protein n=4 Tax=Bifidobacterium RepID=Q8G4G8_BIFLO
RecX-like protein
RecX-like protein {ECO:0000313|EMBL:AAN25215.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_714_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20458..21024
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N0R1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95499.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_122G1_scaffold_714_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21155..21817
DNA (663bp) protein (221aa)
Ribosome-associated protein Y n=12 Tax=Bifidobacterium RepID=B3DR88_BIFLD
hypothetical protein
Ribosome-associated protein Y {ECO:0000313|EMBL:ACD97732.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_714_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21979..23874
DNA (1896bp) protein (632aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BDQ0_BIFLN
preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying 23 items

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