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L1_007_122G1_scaffold_768

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_768_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2..448
DNA (447bp) protein (149aa)
30S ribosomal protein S2 n=5 Tax=Bifidobacterium breve RepID=F9Y0U3_BIFBU
rpsB; SSU ribosomal protein S2P
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_768_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

530..1381
DNA (852bp) protein (284aa)
Elongation factor Ts n=4 Tax=Bifidobacterium breve RepID=F9Y0U2_BIFBU
tsf; Protein Translation Elongation Factor Ts (EF-Ts)
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_768_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1557..2297
DNA (741bp) protein (247aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Uridylate kinase n=5 Tax=Bifidobacterium breve RepID=F9Y0U1_BIFBU
Uridylate kinase
L1_007_122G1_scaffold_768_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2360..2911
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=4 Tax=Bifidobacterium breve RepID=F6C9A0_BIFBA
Ribosome Recycling Factor (RRF)
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_768_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2936..3922
DNA (987bp) protein (329aa)
Phosphatidate cytidylyltransferase n=5 Tax=Bifidobacterium breve RepID=F6C9A1_BIFBA
Phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:AHJ19441.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_768_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3948..5117
DNA (1170bp) protein (390aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Probable dual-specificity RNA methyltransferase RlmN n=4 Tax=Bifidobacterium breve RepID=F6C9A2_BIFBA
Radical SAM family enzyme
L1_007_122G1_scaffold_768_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5118..5561)
DNA (444bp) protein (148aa)
Intracellular protease, PfpI family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPU9_BIFBR
Intracellular protease, PfpI family {ECO:0000313|EMBL:EFE89686.1}; Putative protease {ECO:0000313|EMBL:BAR00091.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ThiJ/PfpI domain-containing protein
L1_007_122G1_scaffold_768_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5853..6623
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Imidazole glycerol phosphate synthase subunit HisF n=5 Tax=Bifidobacterium breve RepID=F6C9A3_BIFBA
Imidazole glycerol phosphate synthase, cyclase subunit
L1_007_122G1_scaffold_768_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6706..7101
DNA (396bp) protein (132aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Phosphoribosyl-AMP cyclohydrolase n=4 Tax=Bifidobacterium breve RepID=F9Y0T6_BIFBU
Phosphoribosyl-AMP cyclohydrolase
L1_007_122G1_scaffold_768_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7306..8862
DNA (1557bp) protein (519aa)
trpE; Anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=2 Tax=Bifidobacterium breve RepID=F9Y0T5_BIFBU
Anthranilate synthase component I {ECO:0000313|EMBL:ERI87220.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_768_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8985..9587
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4E0_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95775.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_768_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9571..10587)
DNA (1017bp) protein (339aa)
membrane protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E7A04C
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ21261.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_768_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10785..11213
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=H3KZV1_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87223.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_768_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11279..11680)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BPU1_BIFBR
Hypothetical protein with DUF488 domain
Uncharacterized protein {ECO:0000313|EMBL:EFE89678.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_768_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11929..12168
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=D4BPT9_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21258.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_768_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12411..12896)
DNA (486bp) protein (162aa)
Amino acid permease n=3 Tax=Bifidobacterium breve RepID=F9Y0S9_BIFBU
Amino acid permease
Amino acid permease {ECO:0000313|EMBL:EFE89674.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_768_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12889..13821)
DNA (933bp) protein (311aa)
Amino acid permease n=2 Tax=Bifidobacterium breve RepID=D4BPT7_BIFBR
Amino acid permease
Amino acid permease {ECO:0000313|EMBL:EFE89674.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_768_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14150..14410)
DNA (261bp) protein (87aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=B7GRT1_BIFLS
putative sucrose transporter
Uncharacterized protein {ECO:0000313|EMBL:EPD74932.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_768_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14437..14715)
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=D4BPT5_BIFBR
Sucrose transporter
Putative truncated transport protein {ECO:0000313|EMBL:BAR00080.1}; Uncharacterized protein {ECO:0000313|EMBL:EFE89672.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_768_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14989..15207)
DNA (219bp) protein (73aa)
Toxin-antitoxin system, toxin component, HipA domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4E8_BIFBR
Toxin-antitoxin system, toxin component, HipA domain protein {ECO:0000313|EMBL:ERI87231.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein
L1_007_122G1_scaffold_768_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15473..15766)
DNA (294bp) protein (98aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DS28_BIFLD
transcriptional regulator, XRE family
Putative transcriptional regulator {ECO:0000313|EMBL:CCY96511.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_122G1_scaffold_768_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15921..16454)
DNA (534bp) protein (178aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BPT1_BIFBR
Conserved hypothetical secreted protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:ABE95768.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_768_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16876..17289
DNA (414bp) protein (138aa)
MerR-type transcriptional regulator n=3 Tax=Bifidobacterium RepID=F9Y0S6_BIFBU
MerR-type transcriptional regulator
MerR-type transcriptional regulator {ECO:0000313|EMBL:AHJ19421.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_768_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17430..17774)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BPS8_BIFBR
Hypothetical membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89665.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_768_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17777..18079)
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B7GRS4_BIFLS
Conserved hypothetical protein with helix-turn-helix motif
Uncharacterized protein {ECO:0000313|EMBL:AHJ21249.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_768_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18363..18944
DNA (582bp) protein (194aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=B7GRS3_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:EEQ55199.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
putative membrane spanning protein
L1_007_122G1_scaffold_768_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19139..20041
DNA (903bp) protein (301aa)
ABC transporter ATP-binding component n=3 Tax=Bifidobacterium RepID=B7GRS2_BIFLS
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE89662.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_768_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20194..20580
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AFA9_BIFBR
Lantibiotic transport ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87236.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_768_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20583..20876
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZKP2_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19410.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_768_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20855..21244
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZS5_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19410.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Displaying items 1-30 of 42 in total

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