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L1_007_122G1_scaffold_813

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_813_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..321
DNA (321bp) protein (107aa)
Peptidase C26 n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AXC1_BIFLN
Peptidase C26 {ECO:0000313|EMBL:EIJ23764.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glutamine amidotransferase, class I
L1_007_122G1_scaffold_813_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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397..759
DNA (363bp) protein (121aa)
ABC transporter, ATP-binding domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AXC2_BIFLN
ABC transporter, ATP-binding domain protein {ECO:0000313|EMBL:EIJ23765.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
amino acid ABC transporter ATP-binding protein
L1_007_122G1_scaffold_813_3
unknown

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998..1093
DNA (96bp) protein (32aa)

This feature has no annotations

L1_007_122G1_scaffold_813_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1450..2412)
DNA (963bp) protein (321aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Uncharacterized protein n=10 Tax=Bacteria RepID=Q8G7W2_BIFLO
hypothetical protein
L1_007_122G1_scaffold_813_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2412..2960)
DNA (549bp) protein (183aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Lipoprotein signal peptidase n=4 Tax=Bifidobacterium longum RepID=D6DB71_BIFLN
peptidase A8
L1_007_122G1_scaffold_813_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2982..4361)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=V6XZD7_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66991.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_122G1_scaffold_813_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4501..4803)
DNA (303bp) protein (101aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=B7GQ25_BIFLS
hypothetical protein
Hemolysin {ECO:0000313|EMBL:KHD94169.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_122G1_scaffold_813_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4925..5404)
DNA (480bp) protein (160aa)
Cell division protein SepF n=21 Tax=Bacteria RepID=SEPF_BIFLD
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_122G1_scaffold_813_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5417..6628)
DNA (1212bp) protein (404aa)
Cell division protein FtsZ n=9 Tax=Bifidobacterium RepID=B3DQ83_BIFLD
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_813_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6740..7984)
DNA (1245bp) protein (415aa)
tRNA-dihydrouridine synthase n=10 Tax=Bacteria RepID=B3DQ82_BIFLD
putative dihydrouridine synthase
Possible NifR3-like protein {ECO:0000313|EMBL:AAN23982.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_813_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8129..9601)
DNA (1473bp) protein (491aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Glycine--tRNA ligase n=15 Tax=Bifidobacterium RepID=E4R1J9_BIFLM
glycyl-tRNA synthase
L1_007_122G1_scaffold_813_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10037..10981
DNA (945bp) protein (315aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Hydroxyethylthiazole kinase n=7 Tax=Bacteria RepID=E4R1J8_BIFLM
hydroxyethylthiazole kinase
L1_007_122G1_scaffold_813_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11064..13169
DNA (2106bp) protein (702aa)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Thiamine biosynthesis bifunctional protein ThiEC n=7 Tax=Bacteria RepID=THIEC_BIFLO
thiamine biosynthesis protein
L1_007_122G1_scaffold_813_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13166..13690
DNA (525bp) protein (175aa)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Thiamine biosynthesis protein ThiC n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZJ3_9BIFI
thiamine biosynthesis protein
L1_007_122G1_scaffold_813_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13894..14712
DNA (819bp) protein (273aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EEQ56272.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EEQ56272.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Phosphomethylpyrimidine kinase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EE28_BIFLI
thiD; phosphomethylpyrimidine kinase
L1_007_122G1_scaffold_813_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14764..15024
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ16_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51896.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Displaying 16 items

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