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L1_007_122G1_scaffold_880

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_880_1
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..123)
DNA (123bp) protein (41aa)
30S ribosomal protein S2 n=7 Tax=Gardnerella vaginalis RepID=S4H281_GARVA
SSU ribosomal protein S2P
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=698958 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 00703Bmash.;"
L1_007_122G1_scaffold_880_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(459..944)
DNA (486bp) protein (162aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Peptide deformylase n=3 Tax=Bifidobacterium breve RepID=F6C996_BIFBA
Peptide deformylase
L1_007_122G1_scaffold_880_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(951..3032)
DNA (2082bp) protein (694aa)
AMP-binding enzyme n=4 Tax=Bifidobacterium breve RepID=F6C995_BIFBA
Long-chain-fatty-acid--CoA ligase
AMP-binding enzyme {ECO:0000313|EMBL:AEF27762.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_880_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3108..3596)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZQ5_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74913.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_880_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3742..4866)
DNA (1125bp) protein (375aa)
IMP dehydrogenase family protein n=5 Tax=Bifidobacterium breve RepID=F6C993_BIFBA
GMP reductase
GMP reductase {ECO:0000313|EMBL:AHJ21276.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_880_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4995..6215
DNA (1221bp) protein (407aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Isocitrate dehydrogenase [NADP] n=3 Tax=Bifidobacterium breve RepID=F6C992_BIFBA
icdA; Isocitrate dehydrogenase [NADP]
L1_007_122G1_scaffold_880_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6356..8041
DNA (1686bp) protein (562aa)
Conserved hypothetical secreted protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0U9_BIFBU
Conserved hypothetical secreted protein {ECO:0000313|EMBL:ABE95790.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Conserved hypothetical secreted protein
L1_007_122G1_scaffold_880_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8054..8578)
DNA (525bp) protein (175aa)
Peptidoglycan-specific endopeptidase, M23 family n=3 Tax=Bifidobacterium breve RepID=F9Y0V0_BIFBU
Peptidoglycan-specific endopeptidase, M23 family
Peptidase, M23 family {ECO:0000313|EMBL:ERI87203.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_880_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9295..9612
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C973_BIFBA
DNA integration/recombination/inversion protein
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:AHJ21280.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_880_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9501..9821)
DNA (321bp) protein (107aa)
Toxin-antitoxin system, toxin component, HipA family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZT2_BIFBR
HipA-like C-terminal domain protein {ECO:0000313|EMBL:EFE89701.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
HipA domain-containing protein
L1_007_122G1_scaffold_880_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10188..10709)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPW5_BIFBR
Fic family protein
Fic family protein {ECO:0000313|EMBL:AHJ21281.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 11 items

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