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L1_007_122G1_scaffold_957

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_957_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(252..1010)
DNA (759bp) protein (253aa)
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9Z3_BIFLN
L1_007_122G1_scaffold_957_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1111..1887)
DNA (777bp) protein (259aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Ribonuclease PH n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DTK8_BIFLD
rph; rph
L1_007_122G1_scaffold_957_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2019..2861)
DNA (843bp) protein (281aa)
Transcriptional regulator, Fis family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY70_BIFLJ
Fis family transcriptional regulator {ECO:0000313|EMBL:KFI72745.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Fis family transcriptional regulator
L1_007_122G1_scaffold_957_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3717..5006)
DNA (1290bp) protein (430aa)
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9Z6_BIFLN
L1_007_122G1_scaffold_957_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5236..5862
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=B3DTL0_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY31688.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_122G1_scaffold_957_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5962..6390)
DNA (429bp) protein (143aa)
Transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRR9_BIFL1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ70463.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_122G1_scaffold_957_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6805..7404
DNA (600bp) protein (200aa)
Tas3 n=6 Tax=Bifidobacterium RepID=E4R097_BIFLM
reductase
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:AIW43341.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_957_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7424..7717)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8M1_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54343.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Hypothetical protein
L1_007_122G1_scaffold_957_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7907..8407
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Phosphopantetheine adenylyltransferase n=18 Tax=Bifidobacterium RepID=COAD_BIFLD
phosphopantetheine adenylyltransferase
L1_007_122G1_scaffold_957_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8415..9305
DNA (891bp) protein (297aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=B3DTL5_BIFLD
hypothetical protein
Cell division protein {ECO:0000313|EMBL:AIW43339.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_957_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9394..10023
DNA (630bp) protein (210aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum subsp. longum RepID=I3AR48_BIFLN
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ21591.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_122G1_scaffold_957_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10112..10306
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=20 Tax=Bifidobacterium RepID=RL32_BIFLD
50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_122G1_scaffold_957_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10459..11187
DNA (729bp) protein (243aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Ribonuclease 3 n=14 Tax=Bifidobacterium RepID=RNC_BIFLO
ribonuclease III
L1_007_122G1_scaffold_957_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11348..13315
DNA (1968bp) protein (656aa)
Acetolactate synthase {ECO:0000313|EMBL:AIW43335.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AIW43335.1};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
IlvB n=12 Tax=Bifidobacterium RepID=E4R0A4_BIFLM
ilvB; ilvb
L1_007_122G1_scaffold_957_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13332..13886
DNA (555bp) protein (185aa)
Acetolactate synthase small subunit n=17 Tax=Bifidobacterium RepID=B3DTM0_BIFLD
acetolactate synthase small subunit
Acetolactate synthase {ECO:0000313|EMBL:AIW43334.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_957_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14042..14320
DNA (279bp) protein (93aa)
Plasmid stability protein n=17 Tax=Bifidobacterium RepID=B3DTM1_BIFLD
plasmid stabilization protein
Arc-like DNA binding domain protein {ECO:0000313|EMBL:EIJ21567.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_122G1_scaffold_957_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14330..14749
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Ribonuclease VapC n=18 Tax=Bifidobacterium RepID=B3DTM2_BIFLD
plasmid stabilization protein
L1_007_122G1_scaffold_957_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14802..17078)
DNA (2277bp) protein (759aa)
ATPase components of ABC transporters with duplicated ATPase domains n=11 Tax=Bifidobacterium RepID=D6DA09_BIFLN
uup2; uup2
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI81767.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_122G1_scaffold_957_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17130..17960
DNA (831bp) protein (277aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
DNA adenine methylase n=2 Tax=Bifidobacterium RepID=C5E8N2_BIFLI
Type II restriction/modification system, methyltransferase
L1_007_122G1_scaffold_957_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17950..19251
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8N3_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54355.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Type II restriction/modification system, endonuclease
L1_007_122G1_scaffold_957_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19420..20070)
DNA (651bp) protein (217aa)
Macrolide export ATP-binding/permease MacB n=2 Tax=unclassified Lachnospiraceae RepID=E5XHQ7_9FIRM
Macrolide export ATP-binding/permease MacB {ECO:0000313|EMBL:EFV19150.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_957_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20073..21302)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=F7JHZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19151.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_007_122G1_scaffold_957_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21520..21975)
DNA (456bp) protein (152aa)
Class I glutamine amidotransferase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8N4_BIFLI
Class I glutamine amidotransferase {ECO:0000313|EMBL:EEQ54356.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
guaA1; Glutamine amidotrasnferase Class I
L1_007_122G1_scaffold_957_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22429..22602
DNA (174bp) protein (58aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Cysteine--tRNA ligase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMH9_BIFBR
Displaying 24 items

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