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L1_007_122G1_scaffold_983

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_983_1
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..76)
DNA (75bp) protein (25aa)
GTP-binding protein TypA {ECO:0000313|EMBL:AFU71185.1}; EC=2.7.1.25 {ECO:0000313|EMBL:AFU71185.1};; EC=2.7.7.4 {ECO:0000313|EMBL:AFU71185.1};; TaxID=1147128 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides (strain PRL2011).;"
GTP-binding protein TypA n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3BHC0_BIFLN
typA; GTP-binding protein
L1_007_122G1_scaffold_983_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(391..1740)
DNA (1350bp) protein (450aa)
Sugar transport protein n=15 Tax=Bifidobacterium RepID=F8APL3_BIFLN
sugar transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ26957.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_122G1_scaffold_983_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1772..3019)
DNA (1248bp) protein (416aa)
Cysteine sulfinate desulfinase/cysteine desulfurase n=13 Tax=Bifidobacterium RepID=B3DQU4_BIFLD
pyridoxal-phosphate-dependent aminotransferase
Putative pyridoxal-phosphate-dependent aminotransferase {ECO:0000313|EMBL:CCY95676.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_122G1_scaffold_983_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3022..3915)
DNA (894bp) protein (298aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=11 Tax=Bifidobacterium RepID=B3DQU3_BIFLD
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KEY25574.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_122G1_scaffold_983_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3919..5550)
DNA (1632bp) protein (544aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L-aspartate oxidase n=8 Tax=Bifidobacterium longum RepID=E8MDW8_BIFL2
L-aspartate oxidase
L1_007_122G1_scaffold_983_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5642..6922)
DNA (1281bp) protein (427aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Quinolinate synthase A n=2 Tax=Bifidobacterium longum RepID=B3DQU1_BIFLD
nadA; quinolinate synthetase
L1_007_122G1_scaffold_983_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6983..7810)
DNA (828bp) protein (276aa)
ADP-ribose pyrophosphatase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCV6_BIFLN
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CBK70327.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_122G1_scaffold_983_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7942..8619)
DNA (678bp) protein (226aa)
Transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APK7_BIFLN
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
transcriptional regulator
L1_007_122G1_scaffold_983_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8671..9468)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q7ZAP0_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25172.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_983_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9487..10386)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4K9_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25171.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_983_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10588..13449)
DNA (2862bp) protein (954aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APK4_BIFLN
ABC transporter {ECO:0000313|EMBL:KEY31452.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_122G1_scaffold_983_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13577..14512)
DNA (936bp) protein (312aa)
Tyrosine recombinase XerD n=14 Tax=Bifidobacterium RepID=D6DCV1_BIFLN
integrase/recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_122G1_scaffold_983_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14573..14956)
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=14 Tax=Bifidobacterium RepID=RL20_BIFLD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_983_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15009..15203)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=20 Tax=Bifidobacterium RepID=RL35_BIFLD
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_983_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15184..15819)
DNA (636bp) protein (212aa)
Translation initiation factor 3 n=13 Tax=Bifidobacterium RepID=B3DQT2_BIFLD
infC; infc
Translation initiation factor IF-3 {ECO:0000313|EMBL:KEY31456.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_122G1_scaffold_983_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16191..17195)
DNA (1005bp) protein (335aa)
Spermidine synthase n=11 Tax=Bifidobacterium RepID=B3DQT1_BIFLD
speE; spee
Spermidine synthase {ECO:0000313|EMBL:ACD97677.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_983_17
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17427..18152
DNA (726bp) protein (242aa)
Thiamine pyrophosphokinase n=11 Tax=Bifidobacterium RepID=B3DQT0_BIFLD
thiamine pyrophosphokinase
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EFV37471.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Displaying 17 items

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