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L1_007_122G1_scaffold_987

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_987_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(67..498)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=18 Tax=Bifidobacterium RepID=RL11_BIFLD
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_122G1_scaffold_987_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(761..1654)
DNA (894bp) protein (298aa)
Transcription termination/antitermination protein NusG n=11 Tax=Bifidobacterium RepID=D6DCC9_BIFLN
transcription termination/antitermination factor NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_122G1_scaffold_987_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1684..1911)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=12 Tax=Bifidobacterium RepID=D6DCD0_BIFLN
preprotein translocase, SecE subunit, bacterial
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_122G1_scaffold_987_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2155..3360)
DNA (1206bp) protein (402aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5ND70_9BIFI
Aspartate aminotransferase {ECO:0000313|EMBL:KEY30758.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
aspartate aminotransferase
L1_007_122G1_scaffold_987_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3451..4584)
DNA (1134bp) protein (378aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Glutamate 5-kinase n=15 Tax=Bifidobacterium RepID=PROB_BIFLD
gamma-glutamyl kinase
L1_007_122G1_scaffold_987_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4585..6276)
DNA (1692bp) protein (564aa)
GTPase Obg n=16 Tax=Bifidobacterium RepID=OBG_BIFLO
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
GTPase
L1_007_122G1_scaffold_987_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6345..6593)
DNA (249bp) protein (83aa)
50S ribosomal protein L27 n=20 Tax=Bifidobacterium RepID=RL27_BIFLD
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_122G1_scaffold_987_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6616..6924)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=18 Tax=Bifidobacterium RepID=RL21_BIFLD
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_122G1_scaffold_987_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7076..9169)
DNA (2094bp) protein (698aa)
Ribonuclease E/G family protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3BAM5_BIFLN
cafA; cafa
S1 RNA binding domain protein {ECO:0000313|EMBL:EEQ56020.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_122G1_scaffold_987_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10287..11561)
DNA (1275bp) protein (425aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4U4_BIFLO
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CCY95413.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
dapE; succinyl-diaminopimelate desuccinylase
L1_007_122G1_scaffold_987_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11599..12018
DNA (420bp) protein (140aa)
Transporter, auxin efflux carrier domain protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BD74_BIFLN
transport protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25080.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_987_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11957..12412
DNA (456bp) protein (152aa)
Auxin Efflux Carrier n=2 Tax=Bifidobacterium longum RepID=D6ZWJ8_BIFLJ
transporter
Auxin efflux carrier {ECO:0000313|EMBL:CCY95414.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_122G1_scaffold_987_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12588..12863)
DNA (276bp) protein (92aa)
Permease component of hypothetical ABC-type transport system n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPJ8_BIFLD
transporter
Putative membrane protein {ECO:0000313|EMBL:EIJ25256.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Displaying 13 items

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