ggKbase home page

L1_007_122G1_scaffold_148_23

Organism: L1_007_122G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: 24442..24954

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigma-70 family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XXD6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 170.0
  • Bit_score: 334
  • Evalue 4.80e-89
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDA09167.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 170.0
  • Bit_score: 334
  • Evalue 6.80e-89
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 171.0
  • Bit_score: 161
  • Evalue 1.20e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium bartlettii CAG:1329 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 513
ATGGACGAAAAATTAATTAAAAAAGCAATAAAGGGAAATTTTAAAGCTTATAGCCTTCTGGTACATAGCTTGAAAAATGAGGGATATAAACTAGCATACACAATATTAAAAAATGAACAAGATAGCATAGATGCATATTTACAAGCAGTGGAAAAGGGCTTGAAAAATATACAAAATTTAAAAGAACCGCAATATTTTAAAACATGGTTTTTAAGAATTGTTATGAATGAGGCTAAAAATATTATAAGTAAGAATAAGAAATTAATATATTTAGAAGATGTTGAAAATACTAGACCAACAAAATCAAAATCAGATAATCAAGAAGAAAAACTTGATTTGGAAAGAAGTTTGGCAAAAATAGAACCTCAAGTTAGAGAAATGATAAGATTGAAATTTTATATGGGTTATAAATTAGACGAAATTGCGAATATACTTGATGTTCCAGTAGGAACCGTAAAAGGAAAGATGTATACAGCTCTTAGAAGTATGAAAAAGGATTTGGAGGTGAGATAA
PROTEIN sequence
Length: 171
MDEKLIKKAIKGNFKAYSLLVHSLKNEGYKLAYTILKNEQDSIDAYLQAVEKGLKNIQNLKEPQYFKTWFLRIVMNEAKNIISKNKKLIYLEDVENTRPTKSKSDNQEEKLDLERSLAKIEPQVREMIRLKFYMGYKLDEIANILDVPVGTVKGKMYTALRSMKKDLEVR*