ggKbase home page

L1_007_122G1_scaffold_148

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_148_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

589..2853
DNA (2265bp) protein (755aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=2 Tax=Clostridiales RepID=R5XN14_9CLOT
L1_007_122G1_scaffold_148_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3101..4450
DNA (1350bp) protein (450aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACW8_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDQ95505.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
extracellular solute-binding protein
L1_007_122G1_scaffold_148_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4603..5448
DNA (846bp) protein (282aa)
ABC transporter, permease protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACW9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDQ95506.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
binding--dependent transport system inner membrane component family protein
L1_007_122G1_scaffold_148_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5448..6332
DNA (885bp) protein (295aa)
ABC transporter permease protein n=2 Tax=Clostridiales RepID=R5X325_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDA10073.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
binding-protein-dependent transport system inner membrane protein
L1_007_122G1_scaffold_148_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6359..7840
DNA (1482bp) protein (494aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX3_9FIRM
L1_007_122G1_scaffold_148_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7901..8935
DNA (1035bp) protein (345aa)
Putative flagellar protein FliS n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX4_9FIRM
Putative flagellar protein FliS {ECO:0000313|EMBL:EDQ95511.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
LacI family transcriptional regulator
L1_007_122G1_scaffold_148_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8973..10085
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDQ95512.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_122G1_scaffold_148_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10158..10787
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95513.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Predicted integral membrane protein
L1_007_122G1_scaffold_148_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10985..12460
DNA (1476bp) protein (492aa)
putative arginine decarboxylase (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX7_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EDQ95514.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_007_122G1_scaffold_148_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12501..13175
DNA (675bp) protein (225aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Thymidylate kinase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX8_9FIRM
thymidylate kinase
L1_007_122G1_scaffold_148_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13274..14212
DNA (939bp) protein (313aa)
Putative DNA polymerase III, delta' subunit n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACX9_9FIRM
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EDQ95516.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
DNA polymerase III subunit delta
L1_007_122G1_scaffold_148_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14206..15105
DNA (900bp) protein (300aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridiales RepID=B0ACY0_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDA10065.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
signal peptidase II
L1_007_122G1_scaffold_148_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15116..15865
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95518.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
methyltransferase
L1_007_122G1_scaffold_148_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15867..16700
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY2_9FIRM
corrin/porphyrin methyltransferase
L1_007_122G1_scaffold_148_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16744..17460
DNA (717bp) protein (239aa)
HDIG domain protein n=2 Tax=Clostridiales RepID=B0ACY3_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EDQ95520.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_148_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17525..17953)
DNA (429bp) protein (143aa)
Transcriptional regulator, AsnC family n=2 Tax=Clostridiales RepID=B0ACY4_9FIRM
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDA09160.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
AsnC family transcriptional regulator
L1_007_122G1_scaffold_148_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17990..19420)
DNA (1431bp) protein (477aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY5_9FIRM
putative nicotinate phosphribosyltransferase
L1_007_122G1_scaffold_148_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19613..20167
DNA (555bp) protein (185aa)
UPI0003D5F422 related cluster n=1 Tax=unknown RepID=UPI0003D5F422
Uncharacterized protein {ECO:0000313|EMBL:ETI93937.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
spmA; spore maturation protein A
L1_007_122G1_scaffold_148_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20167..20691
DNA (525bp) protein (175aa)
Transporter gate domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93936.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
spmB; spore maturation protein B
L1_007_122G1_scaffold_148_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20883..21116
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ACY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09164.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_007_122G1_scaffold_148_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21528..23474
DNA (1947bp) protein (649aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D59B08 related cluster n=1 Tax=unknown RepID=UPI0003D59B08
metG; methionyl-tRNA synthetase
L1_007_122G1_scaffold_148_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23487..24257
DNA (771bp) protein (257aa)
Hydrolase, TatD family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACZ0_9FIRM
Hydrolase, TatD family {ECO:0000313|EMBL:EDQ95527.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
deoxyribonuclease
L1_007_122G1_scaffold_148_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24442..24954
DNA (513bp) protein (171aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XXD6_9CLOT
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDA09167.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_122G1_scaffold_148_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24956..26290
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X0D7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09168.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_007_122G1_scaffold_148_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26684..27232
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Ribonuclease M5 n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9W4_9CLOT
putative DNA-binding protein
L1_007_122G1_scaffold_148_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27234..28100
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D68A18 related cluster n=1 Tax=unknown RepID=UPI0003D68A18
ksgA; dimethyladenosine transferase
L1_007_122G1_scaffold_148_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28165..29565
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XKT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09171.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_148_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29878..30852
DNA (975bp) protein (325aa)
UPI0003D5D6AE related cluster n=1 Tax=unknown RepID=UPI0003D5D6AE
Uncharacterized protein {ECO:0000313|EMBL:ETI93836.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
cation efflux protein
L1_007_122G1_scaffold_148_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30921..31712
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ACZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09173.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_148_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31836..33188)
DNA (1353bp) protein (451aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACZ8_9FIRM
murC; UDP-N-acetylmuramate--L-alanine ligase
Displaying items 1-30 of 83 in total

View Taxonomy