ggKbase home page

L1_007_122G1_scaffold_42_16

Organism: L1_007_122G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: comp(16399..16917)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor SigX n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TVA8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 344
  • Evalue 4.70e-92
Putative RNA polymerase sigma factor SigX {ECO:0000313|EMBL:CCZ62916.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 344
  • Evalue 6.60e-92
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 172.0
  • Bit_score: 276
  • Evalue 4.50e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium hathewayi CAG:224 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 519
GTGCTAAGCGACGATGAATTAGTGGAACAGATACAGGATGGAGATGAAAATGCGGCGGAAGAACTGATAAAACGCTATTATACATCTATTTTGCGTTATTGTAAGTGGCATTGCTCCAACCTGGAGAGGGCGGAAGATCTCACACAGGAAACATTCCTTAAGCTGTTTAAAAACATTTATAGATATAAAGGAAAGAAAAAATTCAAGGCCTACTTATATACCATTGCGAACCATTTGTGTATTGATGAGAGCCGAAAGCTCCAGGCCTATTCCTTAGAAGACGATGAAACAATCTTGAATGAATGTGAGGAAATTCTCCGGGTTGAGGATCGGGAAGAGATAAAATATCTTTTAAATGCGTTATCGTTGGAACAAAGGGAAACCGTGATTCTGCGTTTTGGAGAACAGCTCAGCTTTGAGGAAATTGCAAAGGTTATGGGATGTAATATGAGAACCGCGCAAAGCCGGGTTCGGAACGCATTAAAAGCGATGAGAAAGGAGCAGCAAGATGGAAGATAA
PROTEIN sequence
Length: 173
VLSDDELVEQIQDGDENAAEELIKRYYTSILRYCKWHCSNLERAEDLTQETFLKLFKNIYRYKGKKKFKAYLYTIANHLCIDESRKLQAYSLEDDETILNECEEILRVEDREEIKYLLNALSLEQRETVILRFGEQLSFEEIAKVMGCNMRTAQSRVRNALKAMRKEQQDGR*