ggKbase home page

L1_007_122G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_42_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1187)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95142.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_007_122G1_scaffold_42_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1184..1909)
DNA (726bp) protein (242aa)
Two component transcriptional regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TKY0_9CLOT
Two component transcriptional regulator {ECO:0000313|EMBL:CCZ59616.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
LytTR family transcriptional regulator
L1_007_122G1_scaffold_42_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2368..2661)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T273_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ59618.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2885..3292)
DNA (408bp) protein (136aa)
ASCH domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASR2_9CLOT
ASCH domain protein {ECO:0000313|EMBL:EFC95148.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_42_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3433..4266)
DNA (834bp) protein (278aa)
Nitroreductase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASR1_9CLOT
Nitroreductase family protein {ECO:0000313|EMBL:EFC95147.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
nitroreductase
L1_007_122G1_scaffold_42_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4421..5107)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95146.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_42_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5370..5717)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95145.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_42_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5894..6118)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95144.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Predicted transcriptional regulators
L1_007_122G1_scaffold_42_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7856..10771)
DNA (2916bp) protein (972aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95548.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
cell wall/surface repeat-containing protein
L1_007_122G1_scaffold_42_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11609..11971)
DNA (363bp) protein (121aa)
Amidohydrolase family protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U1C7_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:CCZ62922.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12101..12439
DNA (339bp) protein (113aa)
Transcriptional regulator, HxlR family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARL5_9CLOT
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EFC95546.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_42_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12692..13243)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95544.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_42_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13579..14790)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TI01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62919.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_14
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14792..15667)
DNA (876bp) protein (292aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=D3ARL0_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ62918.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_42_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15651..16409)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U1C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62917.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16399..16917)
DNA (519bp) protein (173aa)
Putative RNA polymerase sigma factor SigX n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TVA8_9CLOT
Putative RNA polymerase sigma factor SigX {ECO:0000313|EMBL:CCZ62916.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ECF subfamily RNA polymerase sigma-70 factor
L1_007_122G1_scaffold_42_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17434..17895
DNA (462bp) protein (154aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium RepID=R5TB53_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ62915.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18340..18519)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=2 Tax=Clostridiales RepID=D4M524_9FIRM
ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_122G1_scaffold_42_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18522..19049)
DNA (528bp) protein (176aa)
Zn-finger-like protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XAT9_9CLOT
Zn-finger-like protein {ECO:0000313|EMBL:ENY92766.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_007_122G1_scaffold_42_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19136..20332)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Acetate kinase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WZ40_9CLOT
acetate kinase
L1_007_122G1_scaffold_42_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20354..20923)
DNA (570bp) protein (190aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Phosphate propanoyltransferase n=2 Tax=Clostridium RepID=R5TKS6_9CLOT
propanediol utilization protein
L1_007_122G1_scaffold_42_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21091..22350
DNA (1260bp) protein (420aa)
UPF0348 protein BN544_02732 n=2 Tax=Clostridium RepID=R5T8R3_9CLOT
UPF0348 protein BN544_02732 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22345..22848)
DNA (504bp) protein (168aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium RepID=D3ASE2_9CLOT
MutT/NUDIX family protein {ECO:0000313|EMBL:CCZ59542.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
NUDIX hydrolase
L1_007_122G1_scaffold_42_24
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22908..23252)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T0J1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ59540.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23358..24548)
DNA (1191bp) protein (397aa)
Methyltransferase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T216_9CLOT
Methyltransferase {ECO:0000313|EMBL:CCZ59538.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24581..25222)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TKR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ59536.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
phosphoglycerate mutase
L1_007_122G1_scaffold_42_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25320..26684)
DNA (1365bp) protein (455aa)
UPF0210 protein BN544_02727 n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T8Q8_9CLOT
UPF0210 protein BN544_02727 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_42_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26728..27000)
DNA (273bp) protein (91aa)
UPF0237 protein HMPREF1093_04504 n=2 Tax=Clostridium RepID=N9VQ20_9CLOT
UPF0237 protein HMPREF1093_04504 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ACT domain-containing protein
L1_007_122G1_scaffold_42_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27020..27817)
DNA (798bp) protein (266aa)
Metallo-beta-lactamase domain protein n=2 Tax=Clostridium RepID=D3APL5_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFC96243.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ribonuclease Z
L1_007_122G1_scaffold_42_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27814..28404)
DNA (591bp) protein (197aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Dephospho-CoA kinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3APL4_9CLOT
dephospho-CoA kinase
Displaying items 1-30 of 164 in total

View Taxonomy