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L1_007_122G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_13_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(145..924)
DNA (780bp) protein (260aa)
UPI0003D5D74D related cluster n=1 Tax=unknown RepID=UPI0003D5D74D
Iron(III) ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETI82037.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphonate ABC transporter ATPase
L1_007_122G1_scaffold_13_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(929..1918)
DNA (990bp) protein (330aa)
UPI0003D64F2B related cluster n=1 Tax=unknown RepID=UPI0003D64F2B
Iron(III) ABC superfamily ATP binding cassette transporter solute-binding protein {ECO:0000313|EMBL:ETI82036.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter substrate-binding protein
L1_007_122G1_scaffold_13_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1933..2955)
DNA (1023bp) protein (341aa)
UPI0003D59EFE related cluster n=1 Tax=unknown RepID=UPI0003D59EFE
Heme ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETI82035.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L1_007_122G1_scaffold_13_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2949..4130)
DNA (1182bp) protein (394aa)
prolyl oligopeptidase (EC:3.4.21.26)
UPI0003D64223 related cluster n=1 Tax=unknown RepID=UPI0003D64223
Peptidase, S9A/B/C family, catalytic protein {ECO:0000313|EMBL:ETI82034.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4273..4377
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Mobiluncus mulieris FB024-16 RepID=E1MC28_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETI82033.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4456..6666
DNA (2211bp) protein (737aa)
UPI0003D5D6CF related cluster n=1 Tax=unknown RepID=UPI0003D5D6CF
Uncharacterized protein {ECO:0000313|EMBL:ETI82032.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_13_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6701..8434
DNA (1734bp) protein (578aa)
UPI0003D5AA5A related cluster n=1 Tax=unknown RepID=UPI0003D5AA5A
Uncharacterized protein {ECO:0000313|EMBL:ETI82031.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_13_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8441..10168
DNA (1728bp) protein (576aa)
UPI0003D5FA9E related cluster n=1 Tax=unknown RepID=UPI0003D5FA9E
Uncharacterized protein {ECO:0000313|EMBL:ETI82030.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_13_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10306..10938)
DNA (633bp) protein (211aa)
UPI0003D64F94 related cluster n=1 Tax=unknown RepID=UPI0003D64F94
Uncharacterized protein {ECO:0000313|EMBL:ETI82029.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein/membrane protein
L1_007_122G1_scaffold_13_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10947..12161)
DNA (1215bp) protein (405aa)
UPI0003D65C91 related cluster n=1 Tax=unknown RepID=UPI0003D65C91
Uncharacterized protein {ECO:0000313|EMBL:ETI82028.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
peptide ABC transporter permease
L1_007_122G1_scaffold_13_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12158..13525)
DNA (1368bp) protein (456aa)
UPI0003D64ABD related cluster n=1 Tax=unknown RepID=UPI0003D64ABD
Uncharacterized protein {ECO:0000313|EMBL:ETI82027.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter membrane protein
L1_007_122G1_scaffold_13_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13733..14254)
DNA (522bp) protein (174aa)
UPI0003D64F4B related cluster n=1 Tax=unknown RepID=UPI0003D64F4B
Uncharacterized protein {ECO:0000313|EMBL:ETI82026.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_13_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14330..15976)
DNA (1647bp) protein (549aa)
UPI0003D62BE9 related cluster n=1 Tax=unknown RepID=UPI0003D62BE9
Uncharacterized protein {ECO:0000313|EMBL:ETI82025.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
RecB family nuclease
L1_007_122G1_scaffold_13_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15984..16979)
DNA (996bp) protein (332aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6489E related cluster n=1 Tax=unknown RepID=UPI0003D6489E
delta-aminolevulinic acid dehydratase
L1_007_122G1_scaffold_13_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17170..18309
DNA (1140bp) protein (380aa)
UPI0003D59DBF related cluster n=1 Tax=unknown RepID=UPI0003D59DBF
Uncharacterized protein {ECO:0000313|EMBL:ETI82023.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18349..18999)
DNA (651bp) protein (217aa)
UPI0003D629E4 related cluster n=1 Tax=unknown RepID=UPI0003D629E4
Response regulator {ECO:0000313|EMBL:ETI82022.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
LuxR family transcriptional regulator
L1_007_122G1_scaffold_13_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19234..20010
DNA (777bp) protein (259aa)
UPI0003D61A57 related cluster n=1 Tax=unknown RepID=UPI0003D61A57
DNA-directed RNA polymerase II subunit RPB1 {ECO:0000313|EMBL:ETI82021.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20106..20900
DNA (795bp) protein (265aa)
UPI0003D5EEF4 related cluster n=1 Tax=unknown RepID=UPI0003D5EEF4
Uncharacterized protein {ECO:0000313|EMBL:ETI82020.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20940..21143
DNA (204bp) protein (68aa)
UPI0003D5B62B related cluster n=1 Tax=unknown RepID=UPI0003D5B62B
Uncharacterized protein {ECO:0000313|EMBL:ETI82019.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21248..22669)
DNA (1422bp) protein (474aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glutamine synthetase, type I (EC:6.3.1.2)
UPI0003D5E738 related cluster n=1 Tax=unknown RepID=UPI0003D5E738
L1_007_122G1_scaffold_13_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22842..23660)
DNA (819bp) protein (273aa)
UPI0003D658A8 related cluster n=1 Tax=unknown RepID=UPI0003D658A8
Uncharacterized protein {ECO:0000313|EMBL:ETI82017.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23824..24576)
DNA (753bp) protein (251aa)
hemC; hydroxymethylbilane synthase (EC:2.5.1.61)
UPI0003D5A285 related cluster n=1 Tax=unknown RepID=UPI0003D5A285
Uncharacterized protein {ECO:0000313|EMBL:ETI82016.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24612..27167)
DNA (2556bp) protein (852aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5A7F5 related cluster n=1 Tax=unknown RepID=UPI0003D5A7F5
hemC; porphobilinogen deaminase
L1_007_122G1_scaffold_13_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27239..28384)
DNA (1146bp) protein (382aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
UPI0003D65E6B related cluster n=1 Tax=unknown RepID=UPI0003D65E6B
L1_007_122G1_scaffold_13_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28550..29866
DNA (1317bp) protein (439aa)
hemA; putative glutamyl-tRNA reductase (EC:1.2.1.70)
glutamyl-tRNA reductase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5DF83
Uncharacterized protein {ECO:0000313|EMBL:ETI82013.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29863..30978
DNA (1116bp) protein (372aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hemH; ferrochelatase (EC:4.99.1.1)
UPI0003D593E5 related cluster n=1 Tax=unknown RepID=UPI0003D593E5
L1_007_122G1_scaffold_13_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31006..31746
DNA (741bp) protein (247aa)
UPI0003D60625 related cluster n=1 Tax=unknown RepID=UPI0003D60625
Uncharacterized protein {ECO:0000313|EMBL:ETI82010.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_13_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31937..32614
DNA (678bp) protein (226aa)
UPI0003D628D2 related cluster n=1 Tax=unknown RepID=UPI0003D628D2
Uncharacterized protein {ECO:0000313|EMBL:ETI82009.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Crp/Fnr family transcriptional regulator
L1_007_122G1_scaffold_13_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32857..34011)
DNA (1155bp) protein (385aa)
UPI0003D5E258 related cluster n=1 Tax=unknown RepID=UPI0003D5E258
Uncharacterized protein {ECO:0000313|EMBL:ETI82008.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_13_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34143..35429)
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
adenylosuccinate synthetase (EC:6.3.4.4)
UPI0003D5E4C2 related cluster n=1 Tax=unknown RepID=UPI0003D5E4C2
Displaying items 1-30 of 251 in total

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