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L1_007_122G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_142_1
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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770..1624
DNA (855bp) protein (285aa)
rRNA adenine N-6-methyltransferase n=2 Tax=Propionibacteriaceae RepID=S2W0Z8_9ACTO
Erm(X) {ECO:0000313|EMBL:AHM10319.1}; TaxID=59505 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii.;"
erm(X); 23S rRNA methyltransferase
L1_007_122G1_scaffold_142_2
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1672..1848
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2WWC5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD32049.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
hypothetical protein
L1_007_122G1_scaffold_142_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2453..2755
DNA (303bp) protein (101aa)
UPI0003D6569B related cluster n=1 Tax=unknown RepID=UPI0003D6569B
XRE family transcriptional regulator {ECO:0000313|EMBL:ETI83252.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
XRE family transcriptional regulator
L1_007_122G1_scaffold_142_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3049..4332
DNA (1284bp) protein (428aa)
UPI0003D5E147 related cluster n=1 Tax=unknown RepID=UPI0003D5E147
Uncharacterized protein {ECO:0000313|EMBL:ETI83251.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Predicted ATPase (AAA+ superfamily)
L1_007_122G1_scaffold_142_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4475..4762)
DNA (288bp) protein (96aa)
UPI0003D5C708 related cluster n=1 Tax=unknown RepID=UPI0003D5C708
Uncharacterized protein {ECO:0000313|EMBL:ETI83250.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_142_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4887..5840
DNA (954bp) protein (318aa)
UPI0003D5F67F related cluster n=1 Tax=unknown RepID=UPI0003D5F67F
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tyrosine recombinase XerD
L1_007_122G1_scaffold_142_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6373..7209
DNA (837bp) protein (279aa)
UPI0003D688BA related cluster n=1 Tax=unknown RepID=UPI0003D688BA
Uncharacterized protein {ECO:0000313|EMBL:ETI83248.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Cobyrinic acid ac-diamide synthase
L1_007_122G1_scaffold_142_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7193..8077
DNA (885bp) protein (295aa)
UPI0003D67BA1 related cluster n=1 Tax=unknown RepID=UPI0003D67BA1
Segregation and condensation protein A {ECO:0000313|EMBL:ETI83247.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
chromosome segregation and condensation protein ScpA
L1_007_122G1_scaffold_142_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8070..8642
DNA (573bp) protein (191aa)
segregation and condensation protein B n=1 Tax=Varibaculum cambriense RepID=UPI0003B66048
Uncharacterized protein {ECO:0000313|EMBL:ETI83246.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
condensin subunit ScpB
L1_007_122G1_scaffold_142_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8702..9568
DNA (867bp) protein (289aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5F7F8 related cluster n=1 Tax=unknown RepID=UPI0003D5F7F8
pseudouridine synthase
L1_007_122G1_scaffold_142_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9578..10708
DNA (1131bp) protein (377aa)
UPI0003D5EB84 related cluster n=1 Tax=unknown RepID=UPI0003D5EB84
Uncharacterized protein {ECO:0000313|EMBL:ETI83244.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Prephenate dehydrogenase
L1_007_122G1_scaffold_142_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10830..11540
DNA (711bp) protein (237aa)
(d)CMP kinase {ECO:0000256|SAAS:SAAS00249031}; EC=2.7.4.25 {ECO:0000256|SAAS:SAAS00249031};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
cytidylate kinase (EC:2.7.4.14)
UPI0003D67EBB related cluster n=1 Tax=unknown RepID=UPI0003D67EBB
L1_007_122G1_scaffold_142_13
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11582..13021
DNA (1440bp) protein (480aa)
Ribosome biogenesis GTPase Der n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1I0_9ACTO
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=525245 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces coleocanis DSM 15436.;"
ribosome-associated GTPase EngA
L1_007_122G1_scaffold_142_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13392..14000
DNA (609bp) protein (203aa)
UPI0003D604E6 related cluster n=1 Tax=unknown RepID=UPI0003D604E6
Two-component system response regulator {ECO:0000313|EMBL:ETI83240.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative ethanolamine two-component response regulator
L1_007_122G1_scaffold_142_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14079..16742
DNA (2664bp) protein (888aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5F606 related cluster n=1 Tax=unknown RepID=UPI0003D5F606
DNA polymerase I
L1_007_122G1_scaffold_142_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16967..18424
DNA (1458bp) protein (486aa)
30S ribosomal protein S1 n=1 Tax=Varibaculum cambriense RepID=UPI0003B5B20F
Uncharacterized protein {ECO:0000313|EMBL:ETI83238.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpsA; 30S ribosomal protein S1
L1_007_122G1_scaffold_142_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18601..19092
DNA (492bp) protein (164aa)
UPI0003D5F031 related cluster n=1 Tax=unknown RepID=UPI0003D5F031
Uncharacterized protein {ECO:0000313|EMBL:ETI83237.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_142_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19121..20671
DNA (1551bp) protein (517aa)
UPI0003D67599 related cluster n=1 Tax=unknown RepID=UPI0003D67599
Uncharacterized protein {ECO:0000313|EMBL:ETI83236.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_142_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20783..21448
DNA (666bp) protein (222aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
dephospho-CoA kinase (EC:2.7.1.24)
UPI0003D5F2B5 related cluster n=1 Tax=unknown RepID=UPI0003D5F2B5
L1_007_122G1_scaffold_142_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21772..22512
DNA (741bp) protein (247aa)
membrane protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6A0DC
Uncharacterized protein {ECO:0000313|EMBL:ETI83234.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
membrane protein
L1_007_122G1_scaffold_142_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22484..23737
DNA (1254bp) protein (418aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D66B57 related cluster n=1 Tax=unknown RepID=UPI0003D66B57
queuine tRNA-ribosyltransferase
L1_007_122G1_scaffold_142_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23773..24585)
DNA (813bp) protein (271aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|SAAS:SAAS00018238}; EC=6.1.1.- {ECO:0000256|SAAS:SAAS00018222};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D66172 related cluster n=1 Tax=unknown RepID=UPI0003D66172
glutamyl-Q tRNA(Asp) ligase
L1_007_122G1_scaffold_142_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24804..26813
DNA (2010bp) protein (670aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
thrS; threonine--tRNA ligase (EC:6.1.1.3)
UPI0003D6109F related cluster n=1 Tax=unknown RepID=UPI0003D6109F
L1_007_122G1_scaffold_142_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26817..27380
DNA (564bp) protein (188aa)
UPI0003D5C5BD related cluster n=1 Tax=unknown RepID=UPI0003D5C5BD
Histidine triad protein {ECO:0000313|EMBL:ETI83230.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
histidine triad (HIT) protein
L1_007_122G1_scaffold_142_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27395..28009
DNA (615bp) protein (205aa)
UPI0003D5E396 related cluster n=1 Tax=unknown RepID=UPI0003D5E396
Uncharacterized protein {ECO:0000313|EMBL:ETI83229.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
CDP-alcohol phosphatidyltransferase
L1_007_122G1_scaffold_142_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28010..28960
DNA (951bp) protein (317aa)
UPI0003D678CB related cluster n=1 Tax=unknown RepID=UPI0003D678CB
Uncharacterized protein {ECO:0000313|EMBL:ETI83228.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
lipid A biosynthesis acyltransferase
L1_007_122G1_scaffold_142_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28957..30087
DNA (1131bp) protein (377aa)
UPI0003D59269 related cluster n=1 Tax=unknown RepID=UPI0003D59269
Uncharacterized protein {ECO:0000313|EMBL:ETI83227.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
group 1 glycosyl transferase
L1_007_122G1_scaffold_142_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30165..31505
DNA (1341bp) protein (447aa)
UPI0003D5E585 related cluster n=1 Tax=unknown RepID=UPI0003D5E585
Uncharacterized protein {ECO:0000313|EMBL:ETI83226.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
membrane protein
L1_007_122G1_scaffold_142_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31507..32094
DNA (588bp) protein (196aa)
UPI0003D68F21 related cluster n=1 Tax=unknown RepID=UPI0003D68F21
NUDIX hydrolase {ECO:0000313|EMBL:ETI83225.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NUDIX hydrolase
L1_007_122G1_scaffold_142_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32184..32945
DNA (762bp) protein (254aa)
UPI0003D62B1D related cluster n=1 Tax=unknown RepID=UPI0003D62B1D
Probable transcriptional regulatory protein Q618_VCMC00001G0805 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
Displaying items 1-30 of 70 in total

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