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L1_007_122G1_scaffold_333

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_333_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(355..546)
DNA (192bp) protein (64aa)
UPI0003D5AFBB related cluster n=1 Tax=unknown RepID=UPI0003D5AFBB
Uncharacterized protein {ECO:0000313|EMBL:ETI82451.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_333_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(549..4754)
DNA (4206bp) protein (1402aa)
UPI0003D5AB2E related cluster n=1 Tax=unknown RepID=UPI0003D5AB2E
Uncharacterized protein {ECO:0000313|EMBL:ETI82450.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_333_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5104..6738)
DNA (1635bp) protein (545aa)
UPI0003D68A14 related cluster n=1 Tax=unknown RepID=UPI0003D68A14
Uncharacterized protein {ECO:0000313|EMBL:ETI82449.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pitB; phosphate permease
L1_007_122G1_scaffold_333_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6934..8268)
DNA (1335bp) protein (445aa)
MFS transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B2EE47
Uncharacterized protein {ECO:0000313|EMBL:ETI82448.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
major facilitator superfamily protein
L1_007_122G1_scaffold_333_5
Actinomyces johnsonii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8789..10492)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Actinomyces johnsonii F0510 RepID=U1R940_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERH16208.1}; TaxID=1227262 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces johnsonii F0510.;"
L1_007_122G1_scaffold_333_6
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10477..11319)
DNA (843bp) protein (281aa)
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA family protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1QR80_9ACTO
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA family protein {ECO:0000313|EMBL:ERH24516.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
multidrug ABC transporter ATPase
L1_007_122G1_scaffold_333_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11617..11787
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6163B
Uncharacterized protein {ECO:0000313|EMBL:ETI82447.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_333_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11919..15407)
DNA (3489bp) protein (1163aa)
UPI0003D62B34 related cluster n=1 Tax=unknown RepID=UPI0003D62B34
Uncharacterized protein {ECO:0000313|EMBL:ETI82446.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_333_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15774..16292)
DNA (519bp) protein (173aa)
UPI0003D66BC7 related cluster n=1 Tax=unknown RepID=UPI0003D66BC7
Uncharacterized protein {ECO:0000313|EMBL:ETI82445.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_333_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16517..19165)
DNA (2649bp) protein (883aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pheT; phenylalanine--tRNA ligase (EC:6.1.1.20)
UPI0003D5A81F related cluster n=1 Tax=unknown RepID=UPI0003D5A81F
L1_007_122G1_scaffold_333_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19168..20253)
DNA (1086bp) protein (362aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5E5ED related cluster n=1 Tax=unknown RepID=UPI0003D5E5ED
phenylalanyl-tRNA synthetase subunit alpha
L1_007_122G1_scaffold_333_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20449..21273
DNA (825bp) protein (275aa)
UPI0003D6448A related cluster n=1 Tax=unknown RepID=UPI0003D6448A
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI82442.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
LacI family transcriptional regulator
L1_007_122G1_scaffold_333_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21444..22355
DNA (912bp) protein (304aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D61F45 related cluster n=1 Tax=unknown RepID=UPI0003D61F45
methionine aminopeptidase
L1_007_122G1_scaffold_333_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22359..23108
DNA (750bp) protein (250aa)
polyphosphate--glucose phosphotransferase (EC:2.7.1.63)
UPI0003D5D46E related cluster n=1 Tax=unknown RepID=UPI0003D5D46E
Uncharacterized protein {ECO:0000313|EMBL:ETI82440.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_333_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23187..24062)
DNA (876bp) protein (292aa)
UPI0003D62171 related cluster n=1 Tax=unknown RepID=UPI0003D62171
Uncharacterized protein {ECO:0000313|EMBL:ETI82439.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_333_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24234..25634
DNA (1401bp) protein (467aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fumarate lyase (EC:4.2.1.2)
UPI0003D5A837 related cluster n=1 Tax=unknown RepID=UPI0003D5A837
L1_007_122G1_scaffold_333_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25688..26536)
DNA (849bp) protein (283aa)
exodeoxyribonuclease III n=1 Tax=Varibaculum cambriense RepID=UPI0003B59F16
Exodeoxyribonuclease III {ECO:0000313|EMBL:ETI82437.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative exodeoxyribonuclease III
L1_007_122G1_scaffold_333_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26563..27672)
DNA (1110bp) protein (370aa)
UPI0003D5E7E6 related cluster n=1 Tax=unknown RepID=UPI0003D5E7E6
Uncharacterized protein {ECO:0000313|EMBL:ETI82436.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
basic membrane protein
L1_007_122G1_scaffold_333_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27687..28589)
DNA (903bp) protein (301aa)
folD; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
UPI0003D64963 related cluster n=1 Tax=unknown RepID=UPI0003D64963
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_333_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28663..29955)
DNA (1293bp) protein (431aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
UPI0003D67F51 related cluster n=1 Tax=unknown RepID=UPI0003D67F51
L1_007_122G1_scaffold_333_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30217..31689
DNA (1473bp) protein (491aa)
UPI0003D66937 related cluster n=1 Tax=unknown RepID=UPI0003D66937
Uncharacterized protein {ECO:0000313|EMBL:ETI82433.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
amino acid permease membrane protein
L1_007_122G1_scaffold_333_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31984..33183)
DNA (1200bp) protein (400aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D655B3 related cluster n=1 Tax=unknown RepID=UPI0003D655B3
carboxylate--amine ligase
L1_007_122G1_scaffold_333_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33194..33949)
DNA (756bp) protein (252aa)
glutamine amidotransferase (EC:6.3.5.2)
UPI0003D6070F related cluster n=1 Tax=unknown RepID=UPI0003D6070F
Uncharacterized protein {ECO:0000313|EMBL:ETI82431.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_333_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33982..35073)
DNA (1092bp) protein (364aa)
UPI0003D61D1D related cluster n=1 Tax=unknown RepID=UPI0003D61D1D
RNA pseudouridine synthase {ECO:0000313|EMBL:ETI82430.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pseudouridylate synthase
L1_007_122G1_scaffold_333_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35170..36114)
DNA (945bp) protein (315aa)
putative ribokinase (EC:2.7.1.15)
UPI0003D67672 related cluster n=1 Tax=unknown RepID=UPI0003D67672
Uncharacterized protein {ECO:0000313|EMBL:ETI82429.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_333_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36104..36607)
DNA (504bp) protein (168aa)
UPI0003D62271 related cluster n=1 Tax=unknown RepID=UPI0003D62271
Uncharacterized protein {ECO:0000313|EMBL:ETI82428.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_333_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36600..37367)
DNA (768bp) protein (256aa)
UPI0003D5B409 related cluster n=1 Tax=unknown RepID=UPI0003D5B409
Uncharacterized protein {ECO:0000313|EMBL:ETI82427.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative photosystem I biogenesis protein BtpA
L1_007_122G1_scaffold_333_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37402..38205)
DNA (804bp) protein (268aa)
UPI0003D6539A related cluster n=1 Tax=unknown RepID=UPI0003D6539A
Uncharacterized protein {ECO:0000313|EMBL:ETI82426.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_333_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38189..39043)
DNA (855bp) protein (285aa)
UPI0003D63053 related cluster n=1 Tax=unknown RepID=UPI0003D63053
Uncharacterized protein {ECO:0000313|EMBL:ETI82425.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_333_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39037..39843)
DNA (807bp) protein (269aa)
UPI0003D642B4 related cluster n=1 Tax=unknown RepID=UPI0003D642B4
Uncharacterized protein {ECO:0000313|EMBL:ETI82424.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
Displaying items 1-30 of 33 in total

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