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L1_007_122G1_scaffold_9_12

Organism: dasL1_007_122G1_concoct_11_fa

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16270..16647

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5FE76 related cluster n=1 Tax=unknown RepID=UPI0003D5FE76 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 251
  • Evalue 3.00e-64
Cold-shock protein {ECO:0000313|EMBL:ETI83617.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 251
  • Evalue 4.20e-64
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 127.0
  • Bit_score: 171
  • Evalue 1.50e-40

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGCCAACCGGAAAAGTTAAGTGGTTTGATGCCGACAAAGGGTTCGGGTTTATCACTGCAGAAGACGGCTCGCAGGTATTTTTACATGCCAGCGTGTTACCTGTTGGCGCTAAACCTCCCTCGGCGGGAACGCGGGTAGAGTTCTCAGTTGCCGACTCCCGCCGCGGCCCGCAAGCCCTATCGGTGCAAATATTGCAACGTACGCCCTCGGTGGCAAAGAATTTGCGGCGCAAACCCAAAGACATGGTGCCGCTAGTAGAAGACCTGATTAAGTTATTGGACGCCTCCTCCGGGCATTTGCGGCATGGACGCTACCCGGATAATGGCGGAAAGATCGCGCAGCTGCTGCGGGCAGTTGCCGACGATTTCGATGCCTAG
PROTEIN sequence
Length: 126
VPTGKVKWFDADKGFGFITAEDGSQVFLHASVLPVGAKPPSAGTRVEFSVADSRRGPQALSVQILQRTPSVAKNLRRKPKDMVPLVEDLIKLLDASSGHLRHGRYPDNGGKIAQLLRAVADDFDA*