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L1_007_122G1_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_9_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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285..1271
DNA (987bp) protein (329aa)
UPI0003D617E1 related cluster n=1 Tax=unknown RepID=UPI0003D617E1
Uncharacterized protein {ECO:0000313|EMBL:ETI83630.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glycosyltransferase
L1_007_122G1_scaffold_9_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1264..1716
DNA (453bp) protein (151aa)
UPI0003D66AEF related cluster n=1 Tax=unknown RepID=UPI0003D66AEF
Oligosaccharide biosynthesis Alg14-like protein {ECO:0000313|EMBL:ETI83629.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
oligosaccharide biosynthesis Alg14-like protein
L1_007_122G1_scaffold_9_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1713..2249
DNA (537bp) protein (179aa)
UPI0003D5A49E related cluster n=1 Tax=unknown RepID=UPI0003D5A49E
Glycosyltransferase 28 protein {ECO:0000313|EMBL:ETI83628.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Glycosyltransferase 28 domain protein
L1_007_122G1_scaffold_9_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2312..3487
DNA (1176bp) protein (392aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UPI0003D5992B related cluster n=1 Tax=unknown RepID=UPI0003D5992B
Uncharacterized protein {ECO:0000313|EMBL:ETI83627.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_9_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3491..4357
DNA (867bp) protein (289aa)
UPI0003D62DBE related cluster n=1 Tax=unknown RepID=UPI0003D62DBE
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tagG1; sugar ABC transporter permease
L1_007_122G1_scaffold_9_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4362..5129
DNA (768bp) protein (256aa)
UPI0003D5DE8F related cluster n=1 Tax=unknown RepID=UPI0003D5DE8F
Uncharacterized protein {ECO:0000313|EMBL:ETI83625.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rfbB; ABC transporter ATP-binding protein
L1_007_122G1_scaffold_9_7
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5332..6537
DNA (1206bp) protein (402aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
carbamoyl phosphate synthase small subunit n=1 Tax=Varibaculum cambriense RepID=UPI0003B641D4
L1_007_122G1_scaffold_9_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6521..9802
DNA (3282bp) protein (1094aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
carbamoyl phosphate synthase large subunit n=1 Tax=Varibaculum cambriense RepID=UPI0003B51BAB
carbamoyl-phosphate synthase large subunit
L1_007_122G1_scaffold_9_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10085..10798)
DNA (714bp) protein (238aa)
UPI0003D6410C related cluster n=1 Tax=unknown RepID=UPI0003D6410C
PspA/IM30 family protein {ECO:0000313|EMBL:ETI83620.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phage shock protein PspA
L1_007_122G1_scaffold_9_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10871..12856)
DNA (1986bp) protein (662aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B398FF
Uncharacterized protein {ECO:0000313|EMBL:ETI83619.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_9_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12947..16138)
DNA (3192bp) protein (1064aa)
UPI0003D5F06A related cluster n=1 Tax=unknown RepID=UPI0003D5F06A
Uncharacterized protein {ECO:0000313|EMBL:ETI83618.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_9_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16270..16647
DNA (378bp) protein (126aa)
UPI0003D5FE76 related cluster n=1 Tax=unknown RepID=UPI0003D5FE76
Cold-shock protein {ECO:0000313|EMBL:ETI83617.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
cold-shock DNA-binding domain-containing protein
L1_007_122G1_scaffold_9_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16676..17449
DNA (774bp) protein (258aa)
UPI0003D6431C related cluster n=1 Tax=unknown RepID=UPI0003D6431C
Uncharacterized protein {ECO:0000313|EMBL:ETI83616.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_9_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17573..19048
DNA (1476bp) protein (492aa)
UPI0003D64572 related cluster n=1 Tax=unknown RepID=UPI0003D64572
Uncharacterized protein {ECO:0000313|EMBL:ETI83615.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NCS2 family nucleobase:cation symporter-2
L1_007_122G1_scaffold_9_15
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19522..19725
DNA (204bp) protein (68aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HN62_9ACTN
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CRH62834.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L1_007_122G1_scaffold_9_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19769..20911)
DNA (1143bp) protein (381aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphoserine aminotransferase (EC:2.6.1.52)
UPI0003D65C2F related cluster n=1 Tax=unknown RepID=UPI0003D65C2F
L1_007_122G1_scaffold_9_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21073..21759
DNA (687bp) protein (229aa)
UPI0003D69746 related cluster n=1 Tax=unknown RepID=UPI0003D69746
Uncharacterized protein {ECO:0000313|EMBL:ETI83612.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
DtxR family iron (metal) dependent repressor
L1_007_122G1_scaffold_9_18
unknown

Not on your lists

21791..21895
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_122G1_scaffold_9_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22027..22761
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B597A9
NlpC/P60 family protein {ECO:0000313|EMBL:ETI83611.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NLP/P60 protein
L1_007_122G1_scaffold_9_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23845..24915)
DNA (1071bp) protein (357aa)
UPI0003D61464 related cluster n=1 Tax=unknown RepID=UPI0003D61464
Uncharacterized protein {ECO:0000313|EMBL:ETI83610.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_9_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25497..26438)
DNA (942bp) protein (314aa)
UPI0003D6290B related cluster n=1 Tax=unknown RepID=UPI0003D6290B
Phage AbiD protein {ECO:0000313|EMBL:ETI83609.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
abortive infection bacteriophage resistance protein
L1_007_122G1_scaffold_9_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27094..27297
DNA (204bp) protein (68aa)
UPI0003D617A6 related cluster n=1 Tax=unknown RepID=UPI0003D617A6
Uncharacterized protein {ECO:0000313|EMBL:ETI83608.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_122G1_scaffold_9_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27562..36420
DNA (8859bp) protein (2953aa)
UPI0003D5FB1D related cluster n=1 Tax=unknown RepID=UPI0003D5FB1D
Uncharacterized protein {ECO:0000313|EMBL:ETI83607.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
cell surface protein
L1_007_122G1_scaffold_9_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36417..37991
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B34826
Uncharacterized protein {ECO:0000313|EMBL:ETI83606.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_122G1_scaffold_9_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38311..39270
DNA (960bp) protein (320aa)
UPI0003D6794D related cluster n=1 Tax=unknown RepID=UPI0003D6794D
Sortase {ECO:0000313|EMBL:ETI83605.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fimbrial protein
L1_007_122G1_scaffold_9_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39439..40371
DNA (933bp) protein (311aa)
UPI0003D5B4A5 related cluster n=1 Tax=unknown RepID=UPI0003D5B4A5
Uncharacterized protein {ECO:0000313|EMBL:ETI83604.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UspA domain-containing protein
L1_007_122G1_scaffold_9_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40650..41900)
DNA (1251bp) protein (417aa)
UPI0003D696BC related cluster n=1 Tax=unknown RepID=UPI0003D696BC
Uncharacterized protein {ECO:0000313|EMBL:ETI83603.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
L1_007_122G1_scaffold_9_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43325..44518
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
methionine adenosyltransferase (EC:2.5.1.6)
UPI0003D62892 related cluster n=1 Tax=unknown RepID=UPI0003D62892
L1_007_122G1_scaffold_9_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44681..47458
DNA (2778bp) protein (926aa)
UPI0003D5E32A related cluster n=1 Tax=unknown RepID=UPI0003D5E32A
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Preprotein translocase subunit SecA
L1_007_122G1_scaffold_9_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47602..48225)
DNA (624bp) protein (208aa)
UPI0003D5A0CF related cluster n=1 Tax=unknown RepID=UPI0003D5A0CF
Uncharacterized protein {ECO:0000313|EMBL:ETI83599.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying items 1-30 of 293 in total

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