ggKbase home page

L1_007_122G1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_30_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(140..790)
DNA (651bp) protein (217aa)
Putative PAC domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YWY7_9CLOT
Putative PAC domain protein {ECO:0000313|EMBL:EGB93475.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(959..1852)
DNA (894bp) protein (298aa)
Putative transcriptional regulator, LysR family n=1 Tax=Clostridium sp. D5 RepID=F0YWY8_9CLOT
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:EGB93476.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LysR family transcriptional regulator
L1_007_122G1_scaffold_30_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2312..3256
DNA (945bp) protein (315aa)
Putative pyruvate formate-lyase 1 activating enzyme n=1 Tax=Clostridium sp. D5 RepID=F0YWY9_9CLOT
Putative pyruvate formate-lyase 1 activating enzyme {ECO:0000313|EMBL:EGB93477.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
glycyl-radical enzyme activator family protein
L1_007_122G1_scaffold_30_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3401..5770
DNA (2370bp) protein (790aa)
Formate acetyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YWZ0_9CLOT
Formate acetyltransferase {ECO:0000313|EMBL:EGB93478.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
pyruvate formate-lyase
L1_007_122G1_scaffold_30_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6225..7340
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWZ1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93479.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7448..8671
DNA (1224bp) protein (408aa)
Alcohol dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YWZ2_9CLOT
Alcohol dehydrogenase {ECO:0000313|EMBL:EGB93480.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
iron-containing alcohol dehydrogenase
L1_007_122G1_scaffold_30_7
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8658..9569
DNA (912bp) protein (304aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding-protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GI23_EUBLK
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding-protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding-protein {ECO:0000313|EMBL:ADO35308.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_122G1_scaffold_30_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9668..10048
DNA (381bp) protein (127aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridium sp. D5 RepID=F0YWZ3_9CLOT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EGB93481.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
endoribonuclease L-PSP
L1_007_122G1_scaffold_30_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10147..11358
DNA (1212bp) protein (404aa)
patB; cystathionine beta-lyase PatB (EC:4.4.1.8)
Aminotransferase n=1 Tax=Clostridium sp. D5 RepID=F0YWZ4_9CLOT
Aminotransferase {ECO:0000313|EMBL:EGB93482.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_30_10
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

11399..12337
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PU64_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL69045.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
hypothetical protein
L1_007_122G1_scaffold_30_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12530..13462)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWZ9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93487.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13472..14140)
DNA (669bp) protein (223aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YX00_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB93488.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14130..14486)
DNA (357bp) protein (119aa)
Transcriptional regulator, PadR family n=1 Tax=Clostridium sp. D5 RepID=F0YX01_9CLOT
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EGB93489.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
PadR family transcriptional regulator
L1_007_122G1_scaffold_30_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15477..16820
DNA (1344bp) protein (448aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. D5 RepID=F0YX02_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EGB93490.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
acetyltransferase
L1_007_122G1_scaffold_30_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16823..17242
DNA (420bp) protein (140aa)
3-dehydroquinate dehydratase, type I {ECO:0000313|EMBL:EET61795.1}; EC=4.2.1.10 {ECO:0000313|EMBL:EET61795.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
3-dehydroquinate dehydratase, type I n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBJ2_9FIRM
hypothetical protein
L1_007_122G1_scaffold_30_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17301..18146
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YX03_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93491.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18399..19490
DNA (1092bp) protein (364aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YX04_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EGB93492.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19517..20137
DNA (621bp) protein (207aa)
Putative transcriptional regulator, TetR family n=1 Tax=Clostridium sp. D5 RepID=F0YX05_9CLOT
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:EGB93493.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative TetR family transcriptional regulator
L1_007_122G1_scaffold_30_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20162..20488)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YX06_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93494.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20559..21824)
DNA (1266bp) protein (422aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Clostridium sp. D5 RepID=F0YX07_9CLOT
L1_007_122G1_scaffold_30_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21867..22529)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YX08_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93496.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22610..23044)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YX09_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93497.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_23
unknown

Not on your lists

23505..23681
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_122G1_scaffold_30_24
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23845..24456
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR98136.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L1_007_122G1_scaffold_30_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24506..25198
DNA (693bp) protein (231aa)
aspartate racemase (EC:5.1.1.13)
Putative aspartate racemase n=1 Tax=Clostridium sp. D5 RepID=F0YX11_9CLOT
Putative aspartate racemase {ECO:0000313|EMBL:EGB93499.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_30_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25327..26079
DNA (753bp) protein (251aa)
Putative arginase n=1 Tax=Clostridium sp. D5 RepID=F0YX13_9CLOT
Putative arginase {ECO:0000313|EMBL:EGB93501.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_30_27
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26243..26611
DNA (369bp) protein (123aa)
Membrane protein n=1 Tax=Streptococcus agalactiae LMG 14747 RepID=V6YZP7_STRAG
Membrane protein {ECO:0000313|EMBL:KEZ89194.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L1_007_122G1_scaffold_30_28
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27035..28222
DNA (1188bp) protein (396aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2K6_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEG73630.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
major facilitator superfamily protein MFS_1
L1_007_122G1_scaffold_30_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28398..29060)
DNA (663bp) protein (221aa)
Methyltransferase domain protein n=139 Tax=Clostridium difficile RepID=T3G6E1_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL31482.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L1_007_122G1_scaffold_30_30
unknown

Not on your lists

29232..29489
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying items 1-30 of 190 in total

View Taxonomy