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L1_007_122G1_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_75_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

890..1570
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YTH8_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94198.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator, XRE family
L1_007_122G1_scaffold_75_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1595..1978
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KM57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39857.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_122G1_scaffold_75_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2021..2605
DNA (585bp) protein (195aa)
HD domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YTH9_9CLOT
HD domain protein {ECO:0000313|EMBL:EGB94199.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_75_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2719..3447
DNA (729bp) protein (243aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
NAD-dependent protein deacetylase n=1 Tax=Clostridium sp. D5 RepID=F0YTI0_9CLOT
NAD-dependent protein deacetylase
L1_007_122G1_scaffold_75_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3594..4556)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YTI1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94201.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted SAM-dependent methyltransferases
L1_007_122G1_scaffold_75_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4942..5568
DNA (627bp) protein (209aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium sp. D5 RepID=F0YTI2_9CLOT
Selenium metabolism protein YedF {ECO:0000313|EMBL:EGB94202.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
selenium metabolism protein YedF
L1_007_122G1_scaffold_75_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5814..6737
DNA (924bp) protein (308aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
selenium donor protein (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Clostridium sp. D5 RepID=F0YTI3_9CLOT
L1_007_122G1_scaffold_75_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6805..8259
DNA (1455bp) protein (485aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
selA; L-seryl-tRNA(Sec) selenium transferase(Selenocysteine synthase) (Sec synthase)(Selenocysteinyl-tRNA(Sec) synthase) (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Clostridium sp. D5 RepID=F0YTI4_9CLOT
L1_007_122G1_scaffold_75_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8222..10138
DNA (1917bp) protein (639aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Clostridium sp. D5 RepID=F0YTI5_9CLOT
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EGB94205.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
elongation factor Tu domain 2 protein
L1_007_122G1_scaffold_75_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10135..11076
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium sp. D5 RepID=F0YTI6_9CLOT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGB94206.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator, LysR family
L1_007_122G1_scaffold_75_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11332..12471
DNA (1140bp) protein (380aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium sp. D5 RepID=F0YTI7_9CLOT
Cysteine desulfurase family protein {ECO:0000313|EMBL:EGB94207.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cysteine desulfurase family protein
L1_007_122G1_scaffold_75_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12930..13685)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YTJ3_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94214.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_75_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13763..14350)
DNA (588bp) protein (196aa)
Putative transcriptional regulator, TetR family n=1 Tax=Clostridium sp. D5 RepID=F0YTJ5_9CLOT
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:EGB94215.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
TetR family transcriptional regulator
L1_007_122G1_scaffold_75_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14579..15616)
DNA (1038bp) protein (346aa)
Proline racemase A (TcPRACA) n=1 Tax=Clostridium sp. D5 RepID=F0YTJ6_9CLOT
Proline racemase A (TcPRACA) {ECO:0000313|EMBL:EGB94216.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
prdF; proline racemase
L1_007_122G1_scaffold_75_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16135..17481
DNA (1347bp) protein (449aa)
Respiratory-chain NADH dehydrogenase 51 Kd subunit superfamily protein n=1 Tax=Clostridium sp. D5 RepID=F0YTJ7_9CLOT
Respiratory-chain NADH dehydrogenase 51 Kd subunit superfamily protein {ECO:0000313|EMBL:EGB94217.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
prdC; electron transfer protein
L1_007_122G1_scaffold_75_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17502..19355
DNA (1854bp) protein (618aa)
prdA; D-proline reductase proprotein prdA [Contains: D-proline reductase subunit beta (D-proline reductase 45 kDa subunit); D-proline reductase subunit alpha (D-proline reductase 23 kDa subunit)] (EC:1.21.4.1)
D-proline reductase, PrdA proprotein n=1 Tax=Clostridium sp. D5 RepID=F0YTJ8_9CLOT
D-proline reductase, PrdA proprotein {ECO:0000313|EMBL:EGB94218.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_75_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19357..19656
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YTJ9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94219.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_75_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19653..20105
DNA (453bp) protein (151aa)
D-proline reductase, PrdB subunit n=1 Tax=Clostridium sp. D5 RepID=F0YTK0_9CLOT
D-proline reductase, PrdB subunit {ECO:0000313|EMBL:EGB94220.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
D-proline reductase (dithiol)
L1_007_122G1_scaffold_75_19
unknown

Not on your lists

21034..21156
DNA (123bp) protein (41aa)

This feature has no annotations

L1_007_122G1_scaffold_75_20
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21379..21696
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=7 Tax=Clostridiales RepID=B0NFI2_CLOSV
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
SSU ribosomal protein S10P
L1_007_122G1_scaffold_75_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21763..22443
DNA (681bp) protein (227aa)
50S ribosomal protein L3 n=1 Tax=Clostridium sp. D5 RepID=F0YTK5_9CLOT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LSU ribosomal protein L3P
L1_007_122G1_scaffold_75_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22475..23095
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Clostridium sp. D5 RepID=F0YTK6_9CLOT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LSU ribosomal protein L4P
L1_007_122G1_scaffold_75_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23095..23394
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Clostridium sp. D5 RepID=F0YTK7_9CLOT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Ribosomal protein L23
L1_007_122G1_scaffold_75_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23490..24332
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Clostridium sp. D5 RepID=F0YTK8_9CLOT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LSU ribosomal protein L2P
L1_007_122G1_scaffold_75_25
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24359..24640
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLV9_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
SSU ribosomal protein S19P
L1_007_122G1_scaffold_75_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24672..25058
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=4 Tax=Clostridiales RepID=A7B540_RUMGN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L22P
L1_007_122G1_scaffold_75_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25073..25729
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=1 Tax=Clostridium sp. D5 RepID=F0YTL1_9CLOT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
SSU ribosomal protein S3P
L1_007_122G1_scaffold_75_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25729..26166
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Clostridium sp. D5 RepID=F0YTL2_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LSU ribosomal protein L16P
L1_007_122G1_scaffold_75_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26156..26362
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Clostridium sp. D5 RepID=F0YTL3_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
50S ribosomal protein L29
L1_007_122G1_scaffold_75_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26374..26631
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Clostridium sp. D5 RepID=F0YTL4_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
30S ribosomal protein S17
Displaying items 1-30 of 132 in total

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