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L1_007_122G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_82_1
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(237..2438)
DNA (2202bp) protein (734aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase {ECO:0000313|EMBL:ADQ03926.1}; EC=3.2.1.22 {ECO:0000313|EMBL:ADQ03926.1};; TaxID=632518 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
Alpha-galactosidase n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q3G6_CALOW
L1_007_122G1_scaffold_82_2
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2449..3618)
DNA (1170bp) protein (390aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVB5_MAHA5
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:AEE95265.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L1_007_122G1_scaffold_82_3
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3605..4624)
DNA (1020bp) protein (340aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Cohnella laeviribosi RepID=UPI000381ABA1
L-glyceraldehyde 3-phosphate reductase
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:AJY74480.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
L1_007_122G1_scaffold_82_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4633..5454)
DNA (822bp) protein (274aa)
Putative uncharacterized protein id=4124039 bin=GWC2_Clostridiales_40_7 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Uncharacterized protein {ECO:0000313|EMBL:EHI57415.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
CUT1 family carbohydrate ABC transporter membrane protein 2
L1_007_122G1_scaffold_82_5
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(5457..6326)
DNA (870bp) protein (290aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family id=4124037 bin=GWC2_Clostridiales_40_7 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
CUT1 family carbohydrate ABC transporter membrane protein 1
Tax=GWC2_Clostridiales_40_7_curated
L1_007_122G1_scaffold_82_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6668..7972)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036872EA
Uncharacterized protein {ECO:0000313|EMBL:EHI57417.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter substrate-binding protein
L1_007_122G1_scaffold_82_7
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8001..8717)
DNA (717bp) protein (239aa)
Trehalose utilization protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A366_MAHA5
PalA
PalA {ECO:0000313|EMBL:AJY76989.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
L1_007_122G1_scaffold_82_8
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(8740..9798)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000369AFBB
hypothetical protein
Tax=CG_Arma_01
L1_007_122G1_scaffold_82_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9983..11788
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00035CE61A
Uncharacterized protein {ECO:0000313|EMBL:EHI57418.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
integral membrane sensor signal transduction histidine kinase
L1_007_122G1_scaffold_82_10
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

11802..13373
DNA (1572bp) protein (524aa)
Two-component response regulator id=4091053 bin=GWC2_Clostridiales_40_7 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=GWC2_Clostridiales_40_7_curated
L1_007_122G1_scaffold_82_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13561..14253)
DNA (693bp) protein (231aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Clostridium sp. D5 RepID=F0YW45_9CLOT
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EGB93883.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_82_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14271..15068)
DNA (798bp) protein (266aa)
Transcriptional regulator, DeoR family n=1 Tax=Clostridium sp. D5 RepID=F0YW44_9CLOT
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EGB93882.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
yulB; HTH-type transcriptional regulator YulB
L1_007_122G1_scaffold_82_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15460..16482)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YW43_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93881.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_82_14
Raoultella planticola, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16554..16889)
DNA (336bp) protein (112aa)
ascorbate-specific PTS system enzyme IIC/IIB n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0D8B
PTS system L-ascorbate-specific transporter subunit IIB
PTS system L-ascorbate-specific transporter subunit IIB {ECO:0000313|EMBL:KJG71975.1}; TaxID=575 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella planticola (Klebsiella planticola).;"
L1_007_122G1_scaffold_82_15
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16921..18273)
DNA (1353bp) protein (451aa)
ascorbate-specific PTS system enzyme IIC/IIB n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0D8A
Uncharacterized protein {ECO:0000313|EMBL:KES16636.1}; TaxID=1445512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola SCGC AB-598-P17.;"
ulaA; PTS system ascorbate-specific transporter subunits IICB
L1_007_122G1_scaffold_82_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18493..19332)
DNA (840bp) protein (280aa)
Putative hydrolase YitU n=1 Tax=Clostridium sp. D5 RepID=F0YW42_9CLOT
Putative hydrolase YitU {ECO:0000313|EMBL:EGB93880.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Cof-like hydrolase
L1_007_122G1_scaffold_82_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19319..20065)
DNA (747bp) protein (249aa)
Putative creatinine amidohydrolase n=1 Tax=Clostridium sp. D5 RepID=F0YW41_9CLOT
Putative creatinine amidohydrolase {ECO:0000313|EMBL:EGB93879.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
creatininase
L1_007_122G1_scaffold_82_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20062..20523)
DNA (462bp) protein (154aa)
PTS system IIA component, L-Asc family (EC:2.7.1.69)
PTS system, IIA component n=1 Tax=Clostridium sp. D5 RepID=F0YW40_9CLOT
PTS system, IIA component {ECO:0000313|EMBL:EGB93878.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_82_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20554..21612)
DNA (1059bp) protein (353aa)
Putative L-ascorbate-6-phosphate lactonase UlaG (L-ascorbate utilization protein G) n=1 Tax=Clostridium sp. D5 RepID=F0YW39_9CLOT
Putative L-ascorbate-6-phosphate lactonase UlaG (L-ascorbate utilization protein G) {ECO:0000313|EMBL:EGB93877.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L-ascorbate 6-phosphate lactonase
L1_007_122G1_scaffold_82_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21922..22125
DNA (204bp) protein (68aa)
Conserved domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YW38_9CLOT
Conserved domain protein {ECO:0000313|EMBL:EGB93876.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cold-shock protein
L1_007_122G1_scaffold_82_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22564..23526
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR45761.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L1_007_122G1_scaffold_82_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24003..25637)
DNA (1635bp) protein (545aa)
Uncharacterized NAD(FAD)-dependent dehydrogenases (EC:1.6.-.-)
Pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YW27_9CLOT
Pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein {ECO:0000313|EMBL:EGB93865.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_82_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25672..26010)
DNA (339bp) protein (113aa)
UPF0251 protein HMPREF0240_00097 n=1 Tax=Clostridium sp. D5 RepID=F0YW26_9CLOT
UPF0251 protein HMPREF0240_00097 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative DNA-binding protein
L1_007_122G1_scaffold_82_24
bacterium UASB14, Bacteria

Not on your lists

comp(26268..27518)
DNA (1251bp) protein (417aa)
Uroporphyrinogen-III decarboxylase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVS8_CLOCD
Uroporphyrinogen-III decarboxylase {ECO:0000313|EMBL:GAK54016.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
uroporphyrinogen-III decarboxylase
L1_007_122G1_scaffold_82_25
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(27593..28537)
DNA (945bp) protein (315aa)
sugar transporter n=1 Tax=Ruegeria conchae RepID=UPI0002378D73
inner-membrane translocator
Tax=RBG_16_Spirochaete_67_19_curated
L1_007_122G1_scaffold_82_26
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(28570..30093)
DNA (1524bp) protein (508aa)
dth:DICTH_0297 ribose transport ATP-binding protein RbsA (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] id=1245501 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ccmA; heme ABC exporter, ATP-binding protein CcmA (EC:3.6.3.41)
Tax=RBG_16_Spirochaete_67_19_curated
L1_007_122G1_scaffold_82_27
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(30230..31264)
DNA (1035bp) protein (345aa)
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein id=1245502 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
sugar ABC transporter substrate-binding protein
Tax=RBG_16_Spirochaete_67_19_curated
L1_007_122G1_scaffold_82_28
unknown

Not on your lists

31583..32011
DNA (429bp) protein (143aa)

This feature has no annotations

L1_007_122G1_scaffold_82_29
Bacillus indicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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32020..33609
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00036578C6
Uncharacterized protein {ECO:0000313|EMBL:KEZ49417.1}; TaxID=1458122 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus indicus LMG 22858.;"
Two component transcriptional regulator, AraC
L1_007_122G1_scaffold_82_30
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

33593..35098
DNA (1506bp) protein (502aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
Histidine kinase n=3 Tax=Thermoanaerobacter RepID=B9P4M8_THEET
integral membrane sensor signal transduction histidine kinase
Displaying items 1-30 of 119 in total

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