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L1_007_122G1_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_191_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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261..1208
DNA (948bp) protein (316aa)
Carboxylesterase n=1 Tax=Clostridium sp. D5 RepID=F0YUF2_9CLOT
Carboxylesterase {ECO:0000313|EMBL:EGB94522.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
alpha/beta hydrolase
L1_007_122G1_scaffold_191_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1212..3026
DNA (1815bp) protein (605aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YUF3_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94523.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Alcohol acetyltransferase.
L1_007_122G1_scaffold_191_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3114..4391
DNA (1278bp) protein (426aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Dihydroorotase n=1 Tax=Clostridium sp. D5 RepID=F0YUF5_9CLOT
dihydroorotase
L1_007_122G1_scaffold_191_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4733..5659
DNA (927bp) protein (309aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Clostridium sp. D5 RepID=F0YUF6_9CLOT
L1_007_122G1_scaffold_191_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5773..6555
DNA (783bp) protein (261aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Clostridium sp. D5 RepID=F0YUF7_9CLOT
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L1_007_122G1_scaffold_191_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6555..7457
DNA (903bp) protein (301aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
dihydroorotate dehydrogenase (subfamily 1) family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YUF8_9CLOT
L1_007_122G1_scaffold_191_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7534..8433)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Blautia producta RepID=UPI0003668A6F
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEG72717.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
LysR family transcriptional regulator
L1_007_122G1_scaffold_191_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8858..9424
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035F56E7
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EDM97710.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
acetyltransferase
L1_007_122G1_scaffold_191_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9729..10013
DNA (285bp) protein (95aa)
Putative excinuclease ABC, A subunit n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWE6_9CLOT
Putative excinuclease ABC, A subunit {ECO:0000313|EMBL:EEG75749.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ABC transporter
L1_007_122G1_scaffold_191_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9968..11089
DNA (1122bp) protein (374aa)
Excinuclease ABC subunit A n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WSP1_9CLOT
Excinuclease ABC subunit A {ECO:0000313|EMBL:ENY90552.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative excinuclease ABC, A subunit
L1_007_122G1_scaffold_191_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12011..12685
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YUG0_9CLOT
L1_007_122G1_scaffold_191_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12698..12847
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YUG1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94531.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_191_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12882..13355
DNA (474bp) protein (158aa)
VanZ like family protein n=1 Tax=Clostridium sp. D5 RepID=F0YUG2_9CLOT
VanZ like family protein {ECO:0000313|EMBL:EGB94532.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
VanZ family protein
L1_007_122G1_scaffold_191_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13333..13701
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YUG3_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94533.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_191_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13703..15775
DNA (2073bp) protein (691aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YUG4_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94534.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Leucyl aminopeptidase (aminopeptidase T)
L1_007_122G1_scaffold_191_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15839..16351
DNA (513bp) protein (171aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium sp. D5 RepID=F0YUG5_9CLOT
L1_007_122G1_scaffold_191_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16377..17402
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium sp. D5 RepID=F0YUG6_9CLOT
PurM; phosphoribosylaminoimidazole synthetase
L1_007_122G1_scaffold_191_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17396..18022
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YUG7_9CLOT
L1_007_122G1_scaffold_191_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18034..19305
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium sp. D5 RepID=F0YUG8_9CLOT
L1_007_122G1_scaffold_191_20
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19523..21049
DNA (1527bp) protein (509aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TZX3_9CLOT
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:CCZ62392.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
two component transcriptional regulator, AraC family
L1_007_122G1_scaffold_191_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21097..22854)
DNA (1758bp) protein (586aa)
Putative two-component sensor histidine kinase YesM n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T9N9_9CLOT
Putative two-component sensor histidine kinase YesM {ECO:0000313|EMBL:CCZ62393.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_191_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23121..24386
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TTP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62391.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter periplasmic subunit
L1_007_122G1_scaffold_191_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24455..25360
DNA (906bp) protein (302aa)
Putative transmembrane permease MsmF n=3 Tax=Clostridium RepID=R5T981_9CLOT
Putative transmembrane permease MsmF {ECO:0000313|EMBL:CCZ62390.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sugar ABC transporter permease
L1_007_122G1_scaffold_191_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25350..26189
DNA (840bp) protein (280aa)
Sugar ABC transporter permease n=1 Tax=Clostridium sp. D5 RepID=F0Z444_9CLOT
Sugar ABC transporter permease {ECO:0000313|EMBL:EGB91157.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
yurM; putative ABC transporter permease protein YurM
L1_007_122G1_scaffold_191_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26195..28810
DNA (2616bp) protein (872aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40185.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycosyl transferase family 2
L1_007_122G1_scaffold_191_26
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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28842..29906
DNA (1065bp) protein (355aa)
Putative uncharacterized protein id=3297698 bin=GWF2_Lentisphaerae_49_21 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
putative uroporphyrinogen-III decarboxylase
Tax=GWF2_Lentisphaerae_49_21_curated
L1_007_122G1_scaffold_191_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30012..31175
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30178.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
uroporphyrinogen decarboxylase (uro-d)
L1_007_122G1_scaffold_191_28
unknown

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31235..31324
DNA (90bp) protein (30aa)

This feature has no annotations

L1_007_122G1_scaffold_191_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31296..33377
DNA (2082bp) protein (694aa)
Penicillin-binding protein 4 n=1 Tax=Clostridium sp. D5 RepID=F0YUH0_9CLOT
Penicillin-binding protein 4 {ECO:0000313|EMBL:EGB94540.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
pbpC; Penicillin-binding protein 3
L1_007_122G1_scaffold_191_30
unknown

Not on your lists

33580..33672
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

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