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L1_007_122G1_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_210_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(628..1095)
DNA (468bp) protein (156aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q2K5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK50269.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_007_122G1_scaffold_210_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1099..2229)
DNA (1131bp) protein (377aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5A3_9CLOT
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:EHI99706.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_210_3
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2204..4000)
DNA (1797bp) protein (599aa)
Cache sensor signal transduction histidine kinase id=4321834 bin=GWC2_Clostridiales_40_7 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEJ20270.1}; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
L1_007_122G1_scaffold_210_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4050..4877)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39453.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_122G1_scaffold_210_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5006..6250
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39452.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_122G1_scaffold_210_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6352..7131)
DNA (780bp) protein (260aa)
Deoxyribose operon repressor n=1 Tax=Clostridium sp. D5 RepID=F0YWA8_9CLOT
Deoxyribose operon repressor {ECO:0000313|EMBL:EGB93946.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
deoxyribose operon repressor
L1_007_122G1_scaffold_210_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7279..9279)
DNA (2001bp) protein (667aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium sp. D5 RepID=F0YWA7_9CLOT
L1_007_122G1_scaffold_210_8
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9276..10220)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JVI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38229.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
nucleoside ABC transporter membrane protein
L1_007_122G1_scaffold_210_9
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10222..11307)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JVV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38228.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
inner-membrane translocator
L1_007_122G1_scaffold_210_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11297..12829)
DNA (1533bp) protein (511aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YWA6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGB93944.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter-like protein
L1_007_122G1_scaffold_210_11
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12917..13753)
DNA (837bp) protein (279aa)
Uridine phosphorylase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWA4_9FIRM
Uridine phosphorylase {ECO:0000313|EMBL:EOS38226.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Uridine phosphorylase
L1_007_122G1_scaffold_210_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13870..14961)
DNA (1092bp) protein (364aa)
Putative basic membrane protein family protein n=1 Tax=Clostridium sp. D5 RepID=F0YWA4_9CLOT
Putative basic membrane protein family protein {ECO:0000313|EMBL:EGB93942.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter substrate-binding protein/surface lipoprotein
L1_007_122G1_scaffold_210_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14987..16312)
DNA (1326bp) protein (442aa)
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase 2 (MTA/SAH deaminase 2) n=1 Tax=Clostridium sp. D5 RepID=F0YWA3_9CLOT
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase 2 (MTA/SAH deaminase 2) {ECO:0000313|EMBL:EGB93941.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
N-ethylammeline chlorohydrolase
L1_007_122G1_scaffold_210_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16322..17491)
DNA (1170bp) protein (390aa)
NADH-dependent butanol dehydrogenase A n=1 Tax=Clostridium sp. D5 RepID=F0YWA2_9CLOT
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:EGB93940.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
iron-containing alcohol dehydrogenase
L1_007_122G1_scaffold_210_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17502..18665)
DNA (1164bp) protein (388aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Clostridium sp. D5 RepID=F0YWA1_9CLOT
L1_007_122G1_scaffold_210_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18675..19127)
DNA (453bp) protein (151aa)
Putative glyoxalase family protein n=1 Tax=Clostridium sp. D5 RepID=F0YWA0_9CLOT
Putative glyoxalase family protein {ECO:0000313|EMBL:EGB93938.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
lactoylglutathione lyase
L1_007_122G1_scaffold_210_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19177..19746)
DNA (570bp) protein (190aa)
Putative BioY family protein n=1 Tax=Clostridium sp. D5 RepID=F0YW99_9CLOT
Putative BioY family protein {ECO:0000313|EMBL:EGB93937.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_210_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19886..21199)
DNA (1314bp) protein (438aa)
transaldolase 1 (EC:2.2.1.2)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YW98_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93936.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_210_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21211..21900)
DNA (690bp) protein (230aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
deoC_1; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium sp. D5 RepID=F0YW97_9CLOT
L1_007_122G1_scaffold_210_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22421..24382)
DNA (1962bp) protein (654aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sp. D5 RepID=F0YWB5_9CLOT
L1_007_122G1_scaffold_210_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24477..24965)
DNA (489bp) protein (163aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. D5 RepID=F0YWB4_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcription elongation factor GreA
L1_007_122G1_scaffold_210_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25113..26072)
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. D5 RepID=F0YWB3_9CLOT
tRNA-U20-dihydrouridine synthase
L1_007_122G1_scaffold_210_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26086..26856)
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Clostridium sp. D5 RepID=F0YWB2_9CLOT
L1_007_122G1_scaffold_210_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26840..27226)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWB1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93949.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_210_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27247..28206)
DNA (960bp) protein (320aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Clostridium sp. D5 RepID=F0YWB0_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_210_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28317..30410)
DNA (2094bp) protein (698aa)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YWA9_9CLOT
L1_007_122G1_scaffold_210_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31071..31913)
DNA (843bp) protein (281aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE85_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEQ56938.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator
L1_007_122G1_scaffold_210_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32292..32777)
DNA (486bp) protein (162aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YW96_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB93934.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_210_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32770..33042)
DNA (273bp) protein (91aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YW96_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB93934.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_210_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33032..33718)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YW95_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93933.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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