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L1_007_122G1_scaffold_243

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_243_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

306..1124
DNA (819bp) protein (273aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium sp. D5 RepID=F0Z3H6_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EGB91240.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
MerR family transcriptional regulator
L1_007_122G1_scaffold_243_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1232..1687
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3H7_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91241.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_243_3
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2055..2192)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3W2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73120.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L1_007_122G1_scaffold_243_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2528..3061
DNA (534bp) protein (178aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Clostridium sp. D5 RepID=F0Z3H8_9CLOT
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EGB91242.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
RNA polymerase sigma factor, sigma-70 family
L1_007_122G1_scaffold_243_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3058..4230
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3H9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91243.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_243_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4373..4762)
DNA (390bp) protein (130aa)
Superoxide reductase n=1 Tax=Clostridium sp. D5 RepID=F0Z3I0_9CLOT
Superoxide reductase {ECO:0000313|EMBL:EGB91244.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
desulfoferrodoxin ferrous iron-binding region
L1_007_122G1_scaffold_243_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4823..5332)
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Ferritin n=1 Tax=Clostridium sp. D5 RepID=F0Z3I1_9CLOT
Ferritin-like protein
L1_007_122G1_scaffold_243_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5544..6209
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40740.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
transcriptional regulator
L1_007_122G1_scaffold_243_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6206..7324
DNA (1119bp) protein (373aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2V3_9FIRM
putative two-component histidine kinase
L1_007_122G1_scaffold_243_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7443..8882
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M433_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65799.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ABC transporter permease
L1_007_122G1_scaffold_243_11
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8896..9555
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LRT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61490.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_122G1_scaffold_243_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9608..9955)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75115.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_122G1_scaffold_243_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10270..11214
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YU06_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94376.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_243_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11628..13217
DNA (1590bp) protein (530aa)
Ribulokinase n=1 Tax=Clostridium sp. D5 RepID=F0Z3I3_9CLOT
Ribulokinase {ECO:0000313|EMBL:EGB91247.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ATPase
L1_007_122G1_scaffold_243_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13244..14590
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3I4_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EGB91248.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
MATE efflux family protein
L1_007_122G1_scaffold_243_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14621..15391
DNA (771bp) protein (257aa)
Transcriptional regulator GlvR n=1 Tax=Clostridium sp. D5 RepID=F0Z0Q8_9CLOT
Transcriptional regulator GlvR {ECO:0000313|EMBL:EGB92679.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_243_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15616..17229
DNA (1614bp) protein (538aa)
PTS system maltose-specific EIICB component n=1 Tax=Clostridium sp. D5 RepID=F0Z0Q9_9CLOT
PTS system maltose-specific EIICB component {ECO:0000313|EMBL:EGB92680.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
PTS maltose-specific transporter subunit IICB
L1_007_122G1_scaffold_243_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17281..18609
DNA (1329bp) protein (443aa)
Maltose-6'-phosphate glucosidase n=1 Tax=Clostridium sp. D5 RepID=F0Z0R0_9CLOT
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:EGB92681.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
glycoside hydrolase family protein
L1_007_122G1_scaffold_243_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18727..20826)
DNA (2100bp) protein (700aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3I5_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EGB91249.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-type transport system, permease
L1_007_122G1_scaffold_243_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20813..21571)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3I6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGB91250.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_243_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21954..22679
DNA (726bp) protein (242aa)
Putative two-component response regulator n=1 Tax=Clostridium sp. D5 RepID=F0Z3I7_9CLOT
Putative two-component response regulator {ECO:0000313|EMBL:EGB91251.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Two-component response regulator
L1_007_122G1_scaffold_243_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22703..23992
DNA (1290bp) protein (430aa)
Putative sensor histidine kinase n=1 Tax=Clostridium sp. D5 RepID=F0Z3I8_9CLOT
Putative sensor histidine kinase {ECO:0000313|EMBL:EGB91252.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
two-component sensor histidine kinase
L1_007_122G1_scaffold_243_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24204..24821
DNA (618bp) protein (206aa)
DedA family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3I9_9CLOT
DedA family protein {ECO:0000313|EMBL:EGB91253.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
alkaline phosphatase
L1_007_122G1_scaffold_243_24
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24835..26232)
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A4Q5_9CLOT
Signal transduction histidine kinase
L1_007_122G1_scaffold_243_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26229..26939)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000365C981
Uncharacterized protein {ECO:0000313|EMBL:EGN32648.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_122G1_scaffold_243_26
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27143..28600)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99382.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L1_007_122G1_scaffold_243_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28890..30116
DNA (1227bp) protein (409aa)
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3J9_9CLOT
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:EGB91263.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L1_007_122G1_scaffold_243_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30177..30359
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3K0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91264.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_243_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30334..31212
DNA (879bp) protein (293aa)
High affinity branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3K1_9CLOT
High affinity branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EGB91265.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
inner-membrane translocator
L1_007_122G1_scaffold_243_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31222..32295
DNA (1074bp) protein (358aa)
High affinity branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3K2_9CLOT
High affinity branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EGB91266.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
inner-membrane translocator
Displaying items 1-30 of 65 in total

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