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L1_007_122G1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_300_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(257..850)
DNA (594bp) protein (198aa)
Histone protein n=1 Tax=Clostridium sp. D5 RepID=F0YTH6_9CLOT
Histone protein {ECO:0000313|EMBL:EGB94196.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_300_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(978..1424)
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium sp. D5 RepID=F0YTH5_9CLOT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGB94195.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator, MarR family
L1_007_122G1_scaffold_300_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1474..2523)
DNA (1050bp) protein (350aa)
Oxidoreductase, 2-nitropropane dioxygenase family n=1 Tax=Clostridium sp. D5 RepID=F0YTH4_9CLOT
Oxidoreductase, 2-nitropropane dioxygenase family {ECO:0000313|EMBL:EGB94194.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Dioxygenases related to 2-nitropropane dioxygenase
L1_007_122G1_scaffold_300_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2547..4244)
DNA (1698bp) protein (566aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, carboxyl transferase, beta subunit n=1 Tax=Clostridium sp. D5 RepID=F0YTH3_9CLOT
L1_007_122G1_scaffold_300_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4334..5668)
DNA (1335bp) protein (445aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Clostridium sp. D5 RepID=F0YTH2_9CLOT
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EGB94192.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_300_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5684..6115)
DNA (432bp) protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Clostridium sp. D5 RepID=F0YTH1_9CLOT
L1_007_122G1_scaffold_300_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6188..6688)
DNA (501bp) protein (167aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium sp. D5 RepID=F0YTH0_9CLOT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EGB94190.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L1_007_122G1_scaffold_300_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6713..7951)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium sp. D5 RepID=F0YTG9_9CLOT
L1_007_122G1_scaffold_300_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7964..8704)
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium sp. D5 RepID=F0YTG8_9CLOT
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EGB94188.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_300_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8698..9618)
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Clostridium sp. D5 RepID=F0YTG7_9CLOT
L1_007_122G1_scaffold_300_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9611..10549)
DNA (939bp) protein (313aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Clostridium sp. D5 RepID=F0YTG6_9CLOT
Putative enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:EGB94186.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_300_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10577..10801)
DNA (225bp) protein (75aa)
Acyl carrier protein n=1 Tax=Clostridium sp. D5 RepID=F0YTG5_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
acyl carrier protein
L1_007_122G1_scaffold_300_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10985..11947)
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium sp. D5 RepID=F0YTG4_9CLOT
L1_007_122G1_scaffold_300_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12923..13144
DNA (222bp) protein (74aa)
Cation transport ATPase, E1-E2 family n=1 Tax=Clostridium sp. D5 RepID=F0YTD7_9CLOT
Cation transport ATPase, E1-E2 family {ECO:0000313|EMBL:EGB94157.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_300_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13611..13835
DNA (225bp) protein (75aa)
Putative cadmium-transporting ATPase (Cadmium effluxATPase) n=1 Tax=Clostridium sp. D5 RepID=F0YTD6_9CLOT
Putative cadmium-transporting ATPase (Cadmium effluxATPase) {ECO:0000313|EMBL:EGB94156.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
heavy metal transport/detoxification protein
L1_007_122G1_scaffold_300_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13964..15745)
DNA (1782bp) protein (594aa)
hymC; putative iron-only hydrogenase, catalytic subunit HymC (EC:1.12.7.2)
Putative [Fe] hydrogenase, large subunit HymC n=1 Tax=Clostridium sp. D5 RepID=F0YTD5_9CLOT
Putative [Fe] hydrogenase, large subunit HymC {ECO:0000313|EMBL:EGB94155.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_300_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15786..18914)
DNA (3129bp) protein (1043aa)
Protein HymB n=1 Tax=Clostridium sp. D5 RepID=F0YTD4_9CLOT
Protein HymB {ECO:0000313|EMBL:EGB94154.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hymB; putative iron-only hydrogenase, electron-transferring subunit HymB
L1_007_122G1_scaffold_300_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18919..19431)
DNA (513bp) protein (171aa)
Fe-hydrogenase, gamma subunit n=1 Tax=Clostridium sp. D5 RepID=F0YTD3_9CLOT
Fe-hydrogenase, gamma subunit {ECO:0000313|EMBL:EGB94153.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hymA; putative iron-only hydrogenase, electron-transferring subunit HymA
L1_007_122G1_scaffold_300_19
unknown

Not on your lists

comp(19456..19584)
DNA (129bp) protein (43aa)

This feature has no annotations

L1_007_122G1_scaffold_300_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19802..20533)
DNA (732bp) protein (244aa)
DnaJ protein n=1 Tax=Clostridium sp. D5 RepID=F0YTD2_9CLOT
DnaJ protein {ECO:0000313|EMBL:EGB94152.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_007_122G1_scaffold_300_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20714..21121)
DNA (408bp) protein (136aa)
Zn-finger containing protein n=1 Tax=Clostridium sp. D5 RepID=F0YTD1_9CLOT
Zn-finger containing protein {ECO:0000313|EMBL:EGB94151.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_300_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21406..22314)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YTD0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94150.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_300_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22329..23816)
DNA (1488bp) protein (496aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YTC9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94149.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_300_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23829..24695)
DNA (867bp) protein (289aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component n=1 Tax=Clostridium sp. D5 RepID=F0YTC8_9CLOT
ABC-type transport system involved in multi-copper enzyme maturation, permease component {ECO:0000313|EMBL:EGB94148.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_300_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24679..25821)
DNA (1143bp) protein (381aa)
ABC transporter, ATP-binding family protein n=1 Tax=Clostridium sp. D5 RepID=F0YTC7_9CLOT
ABC transporter, ATP-binding family protein {ECO:0000313|EMBL:EGB94147.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L1_007_122G1_scaffold_300_26
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26014..27948)
DNA (1935bp) protein (645aa)
Fructan beta-fructosidase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQP0_9CLOT
Fructan beta-fructosidase {ECO:0000313|EMBL:CDC04018.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
sacC; levanase
L1_007_122G1_scaffold_300_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27982..28800)
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQP1_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO62013.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
sugar ABC transporter permease
L1_007_122G1_scaffold_300_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28813..29697)
DNA (885bp) protein (295aa)
ABC transporter, permease protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQP2_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO62014.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
lacF_4; Lactose transport system permease protein LacF
L1_007_122G1_scaffold_300_29
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29785..31086)
DNA (1302bp) protein (434aa)
ABC transporter solute-binding protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MYZ3_9CLOT
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDC04015.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L1_007_122G1_scaffold_300_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31304..33133
DNA (1830bp) protein (610aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N6N2_9CLOT
sensor with HAMP domain
Displaying items 1-30 of 38 in total

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