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L1_007_122G1_scaffold_358

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_358_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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278..2278
DNA (2001bp) protein (667aa)
Putative hydantoinase n=1 Tax=Clostridium sp. D5 RepID=F0YXK4_9CLOT
Putative hydantoinase {ECO:0000313|EMBL:EGB93692.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
dihydropyrimidinase
L1_007_122G1_scaffold_358_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2468..3715
DNA (1248bp) protein (416aa)
Putative two component transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0YXK3_9CLOT
Putative two component transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB93691.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_358_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3866..4876
DNA (1011bp) protein (337aa)
MtaA/CmuA family methyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RX95_9FIRM
MtaA/CmuA family methyltransferase {ECO:0000313|EMBL:EHL66272.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
uroporphyrinogen-III decarboxylase
L1_007_122G1_scaffold_358_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4953..6032)
DNA (1080bp) protein (360aa)
CbiG n=1 Tax=Clostridium sp. D5 RepID=F0YXJ0_9CLOT
CbiG {ECO:0000313|EMBL:EGB93678.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cobalamin (vitamin B12) biosynthesis protein CbiG
L1_007_122G1_scaffold_358_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6051..6422)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXI9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93677.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
amino acid-binding ACT domain protein
L1_007_122G1_scaffold_358_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6499..8928)
DNA (2430bp) protein (810aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. D5 RepID=F0YXI7_9CLOT
L1_007_122G1_scaffold_358_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9398..10618)
DNA (1221bp) protein (407aa)
Transporter, major facilitator family n=1 Tax=Clostridium sp. D5 RepID=F0YXI6_9CLOT
Transporter, major facilitator family {ECO:0000313|EMBL:EGB93674.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
major facilitator superfamily protein
L1_007_122G1_scaffold_358_8
unknown

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comp(10645..10941)
DNA (297bp) protein (99aa)

This feature has no annotations

L1_007_122G1_scaffold_358_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11097..12512)
DNA (1416bp) protein (472aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. D5 RepID=F0YXI5_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:EGB93673.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
amino acid carrier protein
L1_007_122G1_scaffold_358_10
unknown

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comp(13121..13216)
DNA (96bp) protein (32aa)

This feature has no annotations

L1_007_122G1_scaffold_358_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13230..14012)
DNA (783bp) protein (261aa)
ZIP zinc transporter family protein n=1 Tax=Clostridium sp. D5 RepID=F0YXI4_9CLOT
ZIP zinc transporter family protein {ECO:0000313|EMBL:EGB93672.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
zinc/iron permease
L1_007_122G1_scaffold_358_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14092..14523)
DNA (432bp) protein (144aa)
Flavodoxin n=1 Tax=Clostridium sp. D5 RepID=F0YXI3_9CLOT
Flavodoxin {ECO:0000313|EMBL:EGB93671.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
flavodoxin, short chain
L1_007_122G1_scaffold_358_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14528..15127)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXI2_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93670.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_358_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15402..15824
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXI1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93669.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_358_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16112..17812)
DNA (1701bp) protein (567aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXI0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93668.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_358_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17896..19341)
DNA (1446bp) protein (482aa)
Trk system potassium uptake protein TrkH n=1 Tax=Clostridium sp. D5 RepID=F0YXH9_9CLOT
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:EGB93667.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Trk-type K+ transport systems, membrane components
L1_007_122G1_scaffold_358_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19352..20710)
DNA (1359bp) protein (453aa)
Potassium uptake protein, Trk family n=1 Tax=Clostridium sp. D5 RepID=F0YXH8_9CLOT
Potassium uptake protein, Trk family {ECO:0000313|EMBL:EGB93666.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
K+ transport systems, NAD-binding component
L1_007_122G1_scaffold_358_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21451..23523)
DNA (2073bp) protein (691aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Translation elongation factor G n=1 Tax=Clostridium sp. D5 RepID=F0YXH7_9CLOT
Translation elongation factor G {ECO:0000313|EMBL:EGB93665.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_358_19
unknown

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23665..24069
DNA (405bp) protein (135aa)

This feature has no annotations

L1_007_122G1_scaffold_358_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24614..25708
DNA (1095bp) protein (365aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YXH4_9CLOT
Prephenate dehydrogenase {ECO:0000313|EMBL:EGB93662.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_358_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25738..27030
DNA (1293bp) protein (431aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YXH3_9CLOT
L1_007_122G1_scaffold_358_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27146..27967)
DNA (822bp) protein (274aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Clostridium sp. D5 RepID=F0YXH2_9CLOT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EGB93660.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_358_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28004..28828)
DNA (825bp) protein (275aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Clostridium sp. D5 RepID=F0YXH1_9CLOT
L1_007_122G1_scaffold_358_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28846..29328)
DNA (483bp) protein (161aa)
HDIG domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YXH0_9CLOT
HDIG domain protein {ECO:0000313|EMBL:EGB93658.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_358_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29347..29901)
DNA (555bp) protein (185aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Clostridium sp. D5 RepID=F0YXG9_9CLOT
L1_007_122G1_scaffold_358_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29898..31193)
DNA (1296bp) protein (432aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Tetrahydrofolate synthase n=1 Tax=Clostridium sp. D5 RepID=F0YXG8_9CLOT
Tetrahydrofolate synthase {ECO:0000313|EMBL:EGB93656.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_358_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31424..32698)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXG7_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93655.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_358_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33475..35163)
DNA (1689bp) protein (563aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Putative [Fe] hydrogenase, large subunit HymC n=1 Tax=Clostridium sp. D5 RepID=F0YXG6_9CLOT
Putative [Fe] hydrogenase, large subunit HymC {ECO:0000313|EMBL:EGB93654.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_358_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35176..37062)
DNA (1887bp) protein (629aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Protein HymB n=1 Tax=Clostridium sp. D5 RepID=F0YXG5_9CLOT
Protein HymB {ECO:0000313|EMBL:EGB93653.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_358_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37067..37540)
DNA (474bp) protein (158aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
NADH dehydrogenase I, E subunit n=1 Tax=Clostridium sp. D5 RepID=F0YXG4_9CLOT
NADH dehydrogenase I, E subunit {ECO:0000313|EMBL:EGB93652.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Displaying 30 items

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