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L1_007_122G1_scaffold_411

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_411_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

764..6016
DNA (5253bp) protein (1751aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003697B1E
Fibronectin type III domain protein {ECO:0000313|EMBL:EFC95511.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
coagulation factor 5/8 type domain-containing protein
L1_007_122G1_scaffold_411_2
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6028..7437
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00038077D9
Uncharacterized protein {ECO:0000313|EMBL:CDE55510.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
cell surface protein precursor, LPXTG-motif cell wall anchor
L1_007_122G1_scaffold_411_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7970..9892
DNA (1923bp) protein (641aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Clostridium sp. D5 RepID=F0YWC6_9CLOT
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) {ECO:0000313|EMBL:EGB93964.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
diguanylate cyclase (GGDEF) domain
L1_007_122G1_scaffold_411_4
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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10208..11302
DNA (1095bp) protein (365aa)
Basic membrane lipoprotein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC97_SPISS
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:ADK79977.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L1_007_122G1_scaffold_411_5
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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11382..12920
DNA (1539bp) protein (513aa)
UPI0002F1110E related cluster n=1 Tax=unknown RepID=UPI0002F1110E
ATPase component of uncharacterized ABC-type transporter {ECO:0000313|EMBL:EIV99401.1}; Flags: Precursor;; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_411_6
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12907..13971
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00037FABCA
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:CQR58190.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L1_007_122G1_scaffold_411_7
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13964..14884
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI0003797C08
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIQ37829.1}; TaxID=1536770 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0345.;"
L1_007_122G1_scaffold_411_8
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14877..15803
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000371830D
rihA; ribonucleoside hydrolase
Ribonucleoside hydrolase {ECO:0000313|EMBL:AIQ20460.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
L1_007_122G1_scaffold_411_9
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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15874..16890
DNA (1017bp) protein (339aa)
Transcriptional regulator, LacI family n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZS37_THEET
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EGD53105.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus JW 200.;"
LacI family transcriptional regulator
L1_007_122G1_scaffold_411_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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16915..17754
DNA (840bp) protein (280aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Purine nucleoside phosphorylase n=1 Tax=Dorea sp. CAG:317 RepID=R6WAI3_9FIRM
inosine guanosine and xanthosine phosphorylase family protein
L1_007_122G1_scaffold_411_11
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17764..18819
DNA (1056bp) protein (352aa)
aIF-2BI family translation initiation factor (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000255|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000255|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000255|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=MTNA_CLOPH
L1_007_122G1_scaffold_411_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18916..19335)
DNA (420bp) protein (140aa)
Putative Rrf2 family protein n=1 Tax=Clostridium sp. D5 RepID=F0YWC7_9CLOT
Putative Rrf2 family protein {ECO:0000313|EMBL:EGB93965.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
BadM/Rrf2 family transcriptional regulator
L1_007_122G1_scaffold_411_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19466..20386)
DNA (921bp) protein (307aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=Clostridium sp. D5 RepID=F0YWC8_9CLOT
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EGB93966.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_411_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20390..20707)
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Clostridium sp. D5 RepID=F0YWC9_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Thioredoxin domain protein
L1_007_122G1_scaffold_411_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20976..21749
DNA (774bp) protein (258aa)
3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase n=1 Tax=Clostridium sp. D5 RepID=F0YWD0_9CLOT
3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase {ECO:0000313|EMBL:EGB93968.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
L1_007_122G1_scaffold_411_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21765..22103
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWD1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93969.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_411_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22517..23239
DNA (723bp) protein (241aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YWD2_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGB93970.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative ABC transport system ATP-binding protein
L1_007_122G1_scaffold_411_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23236..23979
DNA (744bp) protein (248aa)
Putative integral membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YWD3_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative ABC transport system permease
L1_007_122G1_scaffold_411_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24106..24975
DNA (870bp) protein (290aa)
Transcriptional regulator n=1 Tax=Clostridium sp. D5 RepID=F0YWD4_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EGB93972.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
MerR family transcriptional regulator
L1_007_122G1_scaffold_411_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25164..25943
DNA (780bp) protein (260aa)
Chain length regulator n=1 Tax=Clostridium sp. D5 RepID=F0YWD5_9CLOT
Chain length regulator {ECO:0000313|EMBL:EGB93973.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
polysaccharide export protein
L1_007_122G1_scaffold_411_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25962..26747
DNA (786bp) protein (262aa)
Sortase, SrtB family n=1 Tax=Clostridium sp. D5 RepID=F0YWD6_9CLOT
Sortase, SrtB family {ECO:0000313|EMBL:EGB93974.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sortase, SrtB family
L1_007_122G1_scaffold_411_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26722..27798
DNA (1077bp) protein (359aa)
Putative transcriptional regulator, LytR family n=1 Tax=Clostridium sp. D5 RepID=F0YWD7_9CLOT
Putative transcriptional regulator, LytR family {ECO:0000313|EMBL:EGB93975.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cell envelope-related transcriptional attenuator
L1_007_122G1_scaffold_411_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27852..28436
DNA (585bp) protein (195aa)
Hypothetical membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YWD8_9CLOT
Hypothetical membrane protein {ECO:0000313|EMBL:EGB93976.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_411_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29013..29750
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWD9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93977.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
protein-tyrosine phosphatase
L1_007_122G1_scaffold_411_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29814..30515
DNA (702bp) protein (234aa)
Tyrosine-protein kinase CpsD n=1 Tax=Clostridium sp. D5 RepID=F0YWE0_9CLOT
Tyrosine-protein kinase CpsD {ECO:0000313|EMBL:EGB93978.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
non-specific protein-tyrosine kinase
L1_007_122G1_scaffold_411_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30579..31991
DNA (1413bp) protein (471aa)
Exopolysaccharide biosynthesis protein, glycosyl-1-phosphate transferase n=1 Tax=Clostridium sp. D5 RepID=F0YWE1_9CLOT
Exopolysaccharide biosynthesis protein, glycosyl-1-phosphate transferase {ECO:0000313|EMBL:EGB93979.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative priming glycosyl transferase
Displaying 26 items

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