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L1_007_122G1_scaffold_431

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_431_1
unknown

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1..81
DNA (81bp) protein (27aa)

This feature has no annotations

L1_007_122G1_scaffold_431_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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346..2589
DNA (2244bp) protein (748aa)
Alpha-galactosidase n=1 Tax=Clostridium sp. D5 RepID=F0YXT1_9CLOT
Alpha-galactosidase {ECO:0000313|EMBL:EGB93033.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
glycoside hydrolase family protein
L1_007_122G1_scaffold_431_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2611..3480)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0YXT2_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB93034.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_431_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3797..5953
DNA (2157bp) protein (719aa)
Putative PKD n=1 Tax=Clostridium sp. D5 RepID=F0YXT3_9CLOT
Putative PKD {ECO:0000313|EMBL:EGB93035.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_431_5
unknown

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comp(6256..6411)
DNA (156bp) protein (52aa)

This feature has no annotations

L1_007_122G1_scaffold_431_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6491..7186
DNA (696bp) protein (232aa)
Regulatory protein VanR n=1 Tax=Clostridium sp. D5 RepID=F0YXU1_9CLOT
Regulatory protein VanR {ECO:0000313|EMBL:EGB93043.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_122G1_scaffold_431_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7128..8324
DNA (1197bp) protein (399aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
two-component histidine kinase (EC:2.7.13.3)
Sensor protein VanS (Vancomycin resistance protein vanS) n=1 Tax=Clostridium sp. D5 RepID=F0YXU2_9CLOT
L1_007_122G1_scaffold_431_8
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8465..9493
DNA (1029bp) protein (343aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYM2_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEG74950.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L1_007_122G1_scaffold_431_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9500..11221)
DNA (1722bp) protein (574aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Acetolactate synthase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ICQ2_9CLOT
hypothetical protein
L1_007_122G1_scaffold_431_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11321..11893)
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXV2_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG56101.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
TetR family transcriptional regulator
L1_007_122G1_scaffold_431_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12237..13865
DNA (1629bp) protein (543aa)
DNA-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YXU5_9CLOT
DNA-binding protein {ECO:0000313|EMBL:EGB93047.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative membrane protein
L1_007_122G1_scaffold_431_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13862..16036
DNA (2175bp) protein (725aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXU6_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93048.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
alpha-tubulin suppressor and related RCC1 domain-containing protein
L1_007_122G1_scaffold_431_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16087..18645)
DNA (2559bp) protein (853aa)
Response regulator receiver domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3Q4_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG54044.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Signal transduction histidine kinase
L1_007_122G1_scaffold_431_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18682..20307)
DNA (1626bp) protein (542aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BIR2_CLOSY
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI78024.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
diguanylate cyclase (GGDEF) domain
L1_007_122G1_scaffold_431_15
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20469..21932
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JSZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64415.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
regulatory protein GntR HTH
L1_007_122G1_scaffold_431_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22121..22678
DNA (558bp) protein (186aa)
IS605 OrfB family transposase n=2 Tax=root RepID=T5LVL8_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EQM98854.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transposase OrfB
L1_007_122G1_scaffold_431_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23287..24003
DNA (717bp) protein (239aa)
Response regulator n=1 Tax=Clostridium sp. D5 RepID=F0YXU9_9CLOT
Response regulator {ECO:0000313|EMBL:EGB93051.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
response regulator receiver protein
L1_007_122G1_scaffold_431_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24103..24765
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXV0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93052.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_431_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25735..26340
DNA (606bp) protein (202aa)
Methyltransferase domain protein n=2 Tax=Clostridiales RepID=B0NH33_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN37032.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
putative S-adenosylmethionine-dependent methyltransferase
L1_007_122G1_scaffold_431_20
unknown

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26627..27859
DNA (1233bp) protein (411aa)

This feature has no annotations

L1_007_122G1_scaffold_431_21
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27896..28471
DNA (576bp) protein (192aa)
Appr-1-p processing domain protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FV16_9FIRM
Appr-1-p processing domain protein {ECO:0000313|EMBL:CDB12881.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
phage tail assembly-like protein
L1_007_122G1_scaffold_431_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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29103..29597
DNA (495bp) protein (165aa)
Putative uncharacterized protein id=3938230 bin=GWF2_Clostridiales_38_85 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L1_007_122G1_scaffold_431_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29775..30254)
DNA (480bp) protein (160aa)
Putative small multidrug export related protein n=1 Tax=Clostridium sp. D5 RepID=F0YXV4_9CLOT
Putative small multidrug export related protein {ECO:0000313|EMBL:EGB93056.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted membrane protein
Displaying 23 items

View Taxonomy