ggKbase home page

L1_007_122G1_scaffold_437

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_437_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1172..2602
DNA (1431bp) protein (477aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3X9_9CLOT
Orn/Lys/Arg decarboxylase family protein {ECO:0000313|EMBL:EGB91092.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_437_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2595..3188
DNA (594bp) protein (198aa)
Putative guanylate kinase n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y0_9CLOT
Putative guanylate kinase {ECO:0000313|EMBL:EGB91093.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Guanylate kinase
L1_007_122G1_scaffold_437_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3217..3372)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91094.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
chaperonin GroEL
L1_007_122G1_scaffold_437_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3974..4969
DNA (996bp) protein (332aa)
Putative DNA polymerase III, delta prime subunit n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y3_9CLOT
Putative DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:EGB91096.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_437_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4974..5879
DNA (906bp) protein (302aa)
Stage 0 sporulation protein YaaT n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y4_9CLOT
Stage 0 sporulation protein YaaT {ECO:0000313|EMBL:EGB91097.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Uncharacterized homolog of PSP1
L1_007_122G1_scaffold_437_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5869..6564
DNA (696bp) protein (232aa)
SAM-dependent methyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y5_9CLOT
SAM-dependent methyltransferase {ECO:0000313|EMBL:EGB91098.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted O-methyltransferase
L1_007_122G1_scaffold_437_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6641..7486
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y6_9CLOT
conserved hypothetical protein TIGR00096
L1_007_122G1_scaffold_437_8
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8295..9452
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C6H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60407.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
aspartate aminotransferase
L1_007_122G1_scaffold_437_9
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9472..10647
DNA (1176bp) protein (392aa)
hydantoinase/carbamoylase family amidase (EC:3.5.1.87)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CIP0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50359.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L1_007_122G1_scaffold_437_10
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10663..11427
DNA (765bp) protein (255aa)
Hydantoin racemase (EC:5.1.99.5)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C1I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60409.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L1_007_122G1_scaffold_437_11
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11440..12486
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BXP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60410.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L1_007_122G1_scaffold_437_12
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12559..14058
DNA (1500bp) protein (500aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C9Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60411.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
ABC transporter
L1_007_122G1_scaffold_437_13
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14060..15031
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C6I3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50355.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
inner-membrane translocator
L1_007_122G1_scaffold_437_14
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15050..16456
DNA (1407bp) protein (469aa)
D-hydantoinase (EC:3.5.2.-)
Uncharacterized protein n=3 Tax=Blautia RepID=R5C1I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60414.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L1_007_122G1_scaffold_437_15
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

16472..17428
DNA (957bp) protein (319aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
Entner-Doudoroff aldolase n=4 Tax=Roseburia RepID=D4KJ30_9FIRM
Tax=GWF2_Lentisphaerae_44_16_curated
L1_007_122G1_scaffold_437_16
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17449..18207
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C9Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60416.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
IclR family transcriptional regulator
L1_007_122G1_scaffold_437_17
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18243..19196
DNA (954bp) protein (318aa)
sugar kinase, ribokinase (EC:2.7.1.45)
Uncharacterized protein n=3 Tax=Blautia RepID=R5C6I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60417.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L1_007_122G1_scaffold_437_18
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19207..19662
DNA (456bp) protein (152aa)
Transcriptional regulator AsnC family n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z653_9FIRM
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDA29586.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
AsnC family transcriptional regulator
L1_007_122G1_scaffold_437_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19686..20357)
DNA (672bp) protein (224aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y7_9CLOT
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EGB91100.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_122G1_scaffold_437_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20495..21019)
DNA (525bp) protein (175aa)
Spore maturation protein B (Protein SpmB) n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y8_9CLOT
Spore maturation protein B (Protein SpmB) {ECO:0000313|EMBL:EGB91101.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Uncharacterized membrane protein
L1_007_122G1_scaffold_437_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21235..22986
DNA (1752bp) protein (584aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3Y9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91102.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_437_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23027..24103)
DNA (1077bp) protein (359aa)
Sensory box/GGDEF/EAL domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3Z0_9CLOT
Sensory box/GGDEF/EAL domain protein {ECO:0000313|EMBL:EGB91103.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L1_007_122G1_scaffold_437_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24204..24821
DNA (618bp) protein (206aa)
Spore maturation protein A n=1 Tax=Clostridium sp. D5 RepID=F0Z3Z1_9CLOT
Spore maturation protein A {ECO:0000313|EMBL:EGB91104.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
nucleoside recognition domain containing protein
L1_007_122G1_scaffold_437_24
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24909..25715)
DNA (807bp) protein (269aa)
Glucitol operon repressor n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GK81_EUBLK
glucitol operon repressor
Glucitol operon repressor {ECO:0000313|EMBL:ADO36834.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_122G1_scaffold_437_25
unknown

Not on your lists

26078..26257
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_122G1_scaffold_437_26
Gemella sanguinis, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26294..27733
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Gemella sanguinis M325 RepID=F3A6Y4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88767.1}; TaxID=562983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella sanguinis M325.;"
cytosine/purines uracil thiamine allantoin permease
L1_007_122G1_scaffold_437_27
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

27763..28437
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CS11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX70613.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L1_007_122G1_scaffold_437_28
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

28472..29983
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPY4_9CLOT
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
L1_007_122G1_scaffold_437_29
unknown

Not on your lists

29958..30095
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 29 items

View Taxonomy