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L1_007_122G1_scaffold_497

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_497_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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291..758
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXE1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93629.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_497_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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755..2095
DNA (1341bp) protein (447aa)
TrkH family potassium uptake protein (EC:3.6.3.14)
Potassium uptake protein KtrB n=1 Tax=Clostridium sp. D5 RepID=F0YXE2_9CLOT
Potassium uptake protein KtrB {ECO:0000313|EMBL:EGB93630.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_497_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2111..2764
DNA (654bp) protein (218aa)
Potassium uptake protein KtrA n=1 Tax=Clostridium sp. D5 RepID=F0YXE3_9CLOT
Potassium uptake protein KtrA {ECO:0000313|EMBL:EGB93631.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
TrkA-N domain-containing protein
L1_007_122G1_scaffold_497_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2856..4292
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Sensor protein KdpD n=1 Tax=Clostridium sp. D5 RepID=F0YXE4_9CLOT
integral membrane sensor signal transduction histidine kinase
L1_007_122G1_scaffold_497_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4351..5043
DNA (693bp) protein (231aa)
KDP operon transcriptional regulatory protein KdpE n=1 Tax=Clostridium sp. D5 RepID=F0YXE5_9CLOT
KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:EGB93633.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
two component transcriptional regulator
L1_007_122G1_scaffold_497_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5077..5796)
DNA (720bp) protein (240aa)
Putative PHP domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YXE6_9CLOT
Putative PHP domain protein {ECO:0000313|EMBL:EGB93634.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted metal-dependent phosphoesterases (PHP family)
L1_007_122G1_scaffold_497_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5793..6125)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXE7_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93635.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
DRTGG domain.
L1_007_122G1_scaffold_497_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6129..7535)
DNA (1407bp) protein (469aa)
Ferredoxin 2 n=1 Tax=Clostridium sp. D5 RepID=F0YXE8_9CLOT
Ferredoxin 2 {ECO:0000313|EMBL:EGB93636.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Iron only hydrogenase large subunit, C-terminal domain
L1_007_122G1_scaffold_497_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7580..8002)
DNA (423bp) protein (141aa)
Anti-sigma regulatory factor (Ser/Thr protein kinase) n=1 Tax=Clostridium sp. D5 RepID=F0YXE9_9CLOT
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:EGB93637.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
anti-sigma regulatory factor
L1_007_122G1_scaffold_497_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8003..8347)
DNA (345bp) protein (115aa)
Putative DRTGG domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YXF0_9CLOT
Putative DRTGG domain protein {ECO:0000313|EMBL:EGB93638.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_497_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9444..9938
DNA (495bp) protein (165aa)
Fe-hydrogenase, gamma subunit n=1 Tax=Clostridium sp. D5 RepID=F0YXF1_9CLOT
Fe-hydrogenase, gamma subunit {ECO:0000313|EMBL:EGB93639.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L1_007_122G1_scaffold_497_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9943..10503
DNA (561bp) protein (187aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Sensory transduction histidine kinase n=1 Tax=Clostridium sp. D5 RepID=F0YXF2_9CLOT
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_007_122G1_scaffold_497_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10535..10921
DNA (387bp) protein (129aa)
NADP-reducing hydrogenase, subunit B n=1 Tax=Clostridium sp. D5 RepID=F0YXF3_9CLOT
NADP-reducing hydrogenase, subunit B {ECO:0000313|EMBL:EGB93641.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_497_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10937..12724
DNA (1788bp) protein (596aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Protein HymB n=1 Tax=Clostridium sp. D5 RepID=F0YXF4_9CLOT
Protein HymB {ECO:0000313|EMBL:EGB93642.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_497_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12740..14482
DNA (1743bp) protein (581aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Putative [Fe] hydrogenase, large subunit HymC n=1 Tax=Clostridium sp. D5 RepID=F0YXF5_9CLOT
Putative [Fe] hydrogenase, large subunit HymC {ECO:0000313|EMBL:EGB93643.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_497_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15440..17152
DNA (1713bp) protein (571aa)
Ferredoxin 2 n=1 Tax=Clostridium sp. D5 RepID=F0YXF7_9CLOT
Ferredoxin 2 {ECO:0000313|EMBL:EGB93645.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
PAS domain S-box
L1_007_122G1_scaffold_497_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17154..18329
DNA (1176bp) protein (392aa)
Putative stage II sporulation protein E (SpoIIE) n=1 Tax=Clostridium sp. D5 RepID=F0YXF8_9CLOT
Putative stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:EGB93646.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Stage II sporulation protein E (SpoIIE).
L1_007_122G1_scaffold_497_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18389..19822
DNA (1434bp) protein (478aa)
Putative phospholipase D active site domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YXF9_9CLOT
Putative phospholipase D active site domain protein {ECO:0000313|EMBL:EGB93647.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
L1_007_122G1_scaffold_497_19
unknown

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20275..20424
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_122G1_scaffold_497_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20687..22810)
DNA (2124bp) protein (708aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXG1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93649.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_497_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22785..23687)
DNA (903bp) protein (301aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YXG2_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGB93650.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-type multidrug transport system, ATPase component
L1_007_122G1_scaffold_497_22
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23680..24057)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036DEE84
Uncharacterized protein {ECO:0000313|EMBL:EOS41123.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
GntR family transcriptional regulator
Displaying 22 items

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