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L1_007_122G1_scaffold_510

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_510_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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257..622
DNA (366bp) protein (122aa)
Copper-exporting ATPase n=1 Tax=Clostridium sp. D5 RepID=F0YYH5_9CLOT
Copper-exporting ATPase {ECO:0000313|EMBL:EGB93277.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Copper chaperone
L1_007_122G1_scaffold_510_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

815..1864
DNA (1050bp) protein (350aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YYH6_9CLOT
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EGB93278.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_510_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1960..2982
DNA (1023bp) protein (341aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Clostridium sp. D5 RepID=F0YYH7_9CLOT
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EGB93279.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L1_007_122G1_scaffold_510_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3137..4330
DNA (1194bp) protein (398aa)
Sodium:dicarboxylate symporter family protein n=1 Tax=Clostridium sp. D5 RepID=F0YYH8_9CLOT
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:EGB93280.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
solute carrier family 1 (glial high affinity glutamate transporter), member 2
L1_007_122G1_scaffold_510_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4634..5977
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Clostridium sp. D5 RepID=F0YYH9_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EGB93281.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative efflux protein, MATE family
L1_007_122G1_scaffold_510_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6120..6419
DNA (300bp) protein (100aa)
Ethanolamine utilization protein n=1 Tax=Clostridium sp. D5 RepID=F0YYI0_9CLOT
Ethanolamine utilization protein {ECO:0000313|EMBL:EGB93282.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_122G1_scaffold_510_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6437..6715
DNA (279bp) protein (93aa)
Putative ethanolamine utilization protein n=1 Tax=Clostridium sp. D5 RepID=F0YYI1_9CLOT
Putative ethanolamine utilization protein {ECO:0000313|EMBL:EGB93283.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_122G1_scaffold_510_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7035..7865)
DNA (831bp) protein (277aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium sp. D5 RepID=F0YYI2_9CLOT
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:EGB93284.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
delta-lactam-biosynthetic de-N-acetylase
L1_007_122G1_scaffold_510_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8047..8838
DNA (792bp) protein (264aa)
HAD superfamily hydrolase n=1 Tax=Clostridium sp. D5 RepID=F0YYI3_9CLOT
HAD superfamily hydrolase {ECO:0000313|EMBL:EGB93285.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_122G1_scaffold_510_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8866..9849
DNA (984bp) protein (328aa)
alpha-keto acid dehydrogenase (EC:1.1.1.-)
D-specific alpha-keto acid dehydrogenase (Vancomycinresistance protein VanH) n=1 Tax=Clostridium sp. D5 RepID=F0YYI4_9CLOT
D-specific alpha-keto acid dehydrogenase (Vancomycinresistance protein VanH) {ECO:0000313|EMBL:EGB93286.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_510_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9899..10729)
DNA (831bp) protein (277aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YYJ6_9CLOT
L1_007_122G1_scaffold_510_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10732..11787)
DNA (1056bp) protein (352aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium sp. D5 RepID=F0YYJ7_9CLOT
L1_007_122G1_scaffold_510_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11866..12879)
DNA (1014bp) protein (338aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium sp. D5 RepID=F0YYJ8_9CLOT
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EGB93300.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_510_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13174..13533
DNA (360bp) protein (120aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YYJ9_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB93301.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Putative effector of murein hydrolase LrgA
L1_007_122G1_scaffold_510_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13533..14210
DNA (678bp) protein (226aa)
LrgB family protein n=1 Tax=Clostridium sp. D5 RepID=F0YYK0_9CLOT
LrgB family protein {ECO:0000313|EMBL:EGB93302.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Putative effector of murein hydrolase
L1_007_122G1_scaffold_510_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14247..15842
DNA (1596bp) protein (532aa)
Voltage-gated chloride channel family protein n=1 Tax=Clostridium sp. D5 RepID=F0YYK1_9CLOT
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EGB93303.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Group I intron
L1_007_122G1_scaffold_510_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15877..16572
DNA (696bp) protein (232aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Clostridium sp. D5 RepID=F0YYK2_9CLOT
L1_007_122G1_scaffold_510_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16587..17138
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Clostridium sp. D5 RepID=F0YYK3_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ribosome recycling factor
L1_007_122G1_scaffold_510_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17281..17997
DNA (717bp) protein (239aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium sp. D5 RepID=F0YYK4_9CLOT
L1_007_122G1_scaffold_510_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17990..18799
DNA (810bp) protein (270aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YYK5_9CLOT
L1_007_122G1_scaffold_510_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18829..19971
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium sp. D5 RepID=F0YYK6_9CLOT
L1_007_122G1_scaffold_510_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19975..21009
DNA (1035bp) protein (345aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
RIP metalloprotease RseP n=1 Tax=Clostridium sp. D5 RepID=F0YYK7_9CLOT
RIP metalloprotease RseP
L1_007_122G1_scaffold_510_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21172..22437
DNA (1266bp) protein (422aa)
Spore cortex-lytic enzyme SleC n=1 Tax=Clostridium sp. D5 RepID=F0YYK8_9CLOT
Spore cortex-lytic enzyme SleC {ECO:0000313|EMBL:EGB93310.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Putative peptidoglycan-binding domain-containing protein
L1_007_122G1_scaffold_510_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23060..23200)
DNA (141bp) protein (47aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYK9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93311.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_510_25
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23269..23445)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K3I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41015.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Displaying 25 items

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