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L1_007_122G1_scaffold_615

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_615_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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260..940
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YYH4_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGB93276.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_615_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

940..3618
DNA (2679bp) protein (893aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0YYH3_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EGB93275.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter permease
L1_007_122G1_scaffold_615_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3599..4858)
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Sensor protein ResE n=1 Tax=Clostridium sp. D5 RepID=F0YYH2_9CLOT
two-component sensor histidine kinase
L1_007_122G1_scaffold_615_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4855..5520)
DNA (666bp) protein (222aa)
DNA-binding response regulator RegX3 n=1 Tax=Clostridium sp. D5 RepID=F0YYH1_9CLOT
DNA-binding response regulator RegX3 {ECO:0000313|EMBL:EGB93273.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
two-component response regulator
L1_007_122G1_scaffold_615_5
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5517..6407)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EK06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97674.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L1_007_122G1_scaffold_615_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6796..8154)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Clostridium sp. D5 RepID=F0YYH0_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EGB93272.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
mate efflux family protein
L1_007_122G1_scaffold_615_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8147..8584)
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium sp. D5 RepID=F0YYG9_9CLOT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGB93271.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
MarR family transcriptional regulator
L1_007_122G1_scaffold_615_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8980..10161)
DNA (1182bp) protein (394aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Clostridium sp. D5 RepID=F0YYG8_9CLOT
L1_007_122G1_scaffold_615_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10345..10776)
DNA (432bp) protein (144aa)
Cytidine deaminase n=1 Tax=Clostridium sp. D5 RepID=F0YYG7_9CLOT
Cytidine deaminase {ECO:0000313|EMBL:EGB93269.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cytidine deaminase
L1_007_122G1_scaffold_615_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10843..11640)
DNA (798bp) protein (266aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Uridine phosphorylase n=1 Tax=Clostridium sp. D5 RepID=F0YYG6_9CLOT
uridine phosphorylase
L1_007_122G1_scaffold_615_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11716..12909)
DNA (1194bp) protein (398aa)
GGDEF domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YYG5_9CLOT
GGDEF domain protein {ECO:0000313|EMBL:EGB93267.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
signaling protein
L1_007_122G1_scaffold_615_12
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13253..14239)
DNA (987bp) protein (329aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
Ketol-acid reductoisomerase n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2KLB6_TRESO
ketol-acid reductoisomerase
L1_007_122G1_scaffold_615_13
unknown

Not on your lists

comp(14488..14589)
DNA (102bp) protein (34aa)

This feature has no annotations

L1_007_122G1_scaffold_615_14
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14609..15325)
DNA (717bp) protein (239aa)
FCD domain protein n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2MJ32_TRESO
FCD domain protein {ECO:0000313|EMBL:ERF60736.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
GntR family transcriptional regulator
L1_007_122G1_scaffold_615_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15458..15604)
DNA (147bp) protein (49aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0YYG4_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EGB93266.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_615_16
unknown

Not on your lists

comp(15695..15931)
DNA (237bp) protein (79aa)

This feature has no annotations

L1_007_122G1_scaffold_615_17
Cloacibacillus evryensis, Cloacibacillus, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(16080..16646)
DNA (567bp) protein (189aa)
ATP-dependent transcriptional regulator {ECO:0000313|EMBL:EXG78261.1}; TaxID=866499 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Cloacibacillus.;" source="Cloacibacillus evryensis DSM 19522.;"
L1_007_122G1_scaffold_615_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16954..17868)
DNA (915bp) protein (305aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Dorea sp. CAG:105 RepID=R5D2G2_9FIRM
Displaying 18 items

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