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L1_007_122G1_scaffold_205_24

Organism: dasL1_007_122G1_metabat_metabat_1_fa_sub_fa

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: 25647..29006

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 1119.0
  • Bit_score: 2126
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 1118.0
  • Bit_score: 1704
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. D5 RepID=F0Z571_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 1119.0
  • Bit_score: 2126
  • Evalue 0.0

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Taxonomy

Clostridium sp. D5 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3360
ATGCAGGCTTTTTTAGCGCCGCTTGCCGAGCTGGCGGAGTACAAGGAGATATTCGGCAGACGAAAGAAAAACAGCGGAGTTCTGCAGATTACAGGCTGCGTCAATTCCCAGAAAACACATTTGATGTATGCATTGAGCGATGGTTGTTATTATAAAATCATCGCTTTTTCCAGTGATGAAAAGGCAAAGAAGGCTTATGAGGAATACCGGTTCCTGGATGAGAATGTGTATCTGTATCCGGCGAAGGACCTTCTGTTTTACCATGCGGACATTAAGGGAAAGTACCTGATCAAGCAGCGGATGGAGGTGGTACGCGCCATACTCGAGGCGGAGGAAATGGAGAGCCTGGATGAGGGCGGAATCACGGTTATCACAACGATGGACGCTTTTTTGGATGGTATGCCTTCTCTGCGGGAAATTGCAAAGCGCAGGATCCATGTGGAGGGGACGGGGACACTGGATTTTATAAAGCTGCAGGAAAAGCTTTCCGCAATGGGGTATGAACGGGAGGTTGAGATCGAAGGCCCCGGGCAGTATGCGGTCAGGGGCGGTATACTGGATGTGTTCCCTTTGACGGAGGAGCTTCCGGTCCGCATTGAACTGTGGGGGGACGAGGTGGATTCCATCCGGACGTTTGATGTGGAAAGCCAGCGGTCGATCGAGAACCTGGATAATGTGGACATTTATCCCGCAGCGGAATTTCTTGGAGAGCGAGGAAAAAGCGTTTCTTTTCTGGATTATTTCCCAAAGGAAAAGAGCCTGTTGTTTTTGGATGAGCCTCTGCGTCTGGCAGAACATGCGGATGAAACCGCGGAAGAGTATCTGAACAGCCGGAAAAACAGGGAAGAAGCCGGGATGCAGGAGGAAGAGGAACCGGAAATTTTTTCAACGAAGGTGATTGTAGATAAGATGAACCAGTATTACGGCATCGGTCTTACAACGCTGGAATCTAAATGCGGCGGTTTTCATGTGCGGGATACCTACAGTCTGCAGACGAAAGGGGTCAATCCCTACAATAACAGCTTCGAGATGCTTACAAGGGACCTGAAGCGCCTGAAAAGAAGCGGTTACCGGGTGATACTGCTTTCCGGTTCCCGGACCCGGGCAAGACGGCTTGCCGAGGATCTGCGGGATTATGACCTGAGCAGTTTTTACAGCGAGGATATGCACCGGGAAGTGCAGCCCGGGGAGATCATGGCCGCCTACGGACATGTTGCGGAGGGGTACGAGTACCCGATGCTGAAGTTTATGGTGATATCCGAGACGGATATTTTCGGGAAGCAGAAGCGCAAAAAACGGCGCAGGACCTATGAAGGCCAGAAGATCCAGAATTTTTCCGAACTCAAGGTAGGCGACTATGTCGTTCATGAAAATCACGGCCTTGGTATCTACCAAGGGATTGAGAAGATTGAAGTTGATAAAGTAACCAAAGATTATATGAAGATTTCCTATGCTGGCGGAGGGGCGCTGTATATTCTGGCTACCCAGCTAGATCTGATCCAGAAGTACGCCGGTGCGGATGCGAAAAAGCCGAAACTGAACAAGCTGGGCACCAGCCAGTGGACAAAGACAAAGAGCCAGGTGCGCAGAGCTGTCAGGGCAGTGGCAAAGGATCTGGTGGAGCTTTATGCGGCAAGGCAGGAGTCCCAGGGATTCGTATATGAACCGGATACCGTGTGGCAGAAGGAATTCGAGGAGATGTTTCCTTTTGAGGAGACCGATGACCAGCTGCAGGCGATTGCGGACACAAAGCGGGACATGGAAAGCAAAAAGATCATGGACCGGCTGATCTGCGGGGATGTGGGTTACGGAAAAACAGAGATTGCGATCCGGGCGGCATTTAAGGCGGTACAGGAAGGGAAACAGGTAGTCTATCTGGTACCGACCACGATTCTGGCCCAGCAGCACTATAATACCTTTGTGCAGCGGATGCGGGATTTTCCGGTCAGGGTAGACCTCCTGTGCCGGTTCCGTACATCGGCTCAGCAAAAGAAGACAGTGGAGGATTTAAAAAAAGGGCTGGTGGATATTGTGATCGGCACCCACAGAGTGCTCTCCAAGGACGTACAGTTTAAAGACCTGGGGCTGCTCGTGATCGATGAGGAGCAGCGTTTTGGCGTTACCCATAAAGAGAAGATCAAAAAGCTCCGGGAGAATGTGGATGTGCTGACGCTGACAGCAACGCCGATCCCGAGGACACTCCATATGAGTCTGATCGGGATCCGGGATATGAGCGTCCTGGAGGAGGCCCCTATGGACAGAATGCCGATCCAGACCTATGTCATGGAATACAACGATGAGATGGTCCGGGAGGCCATAGAGAGGGAACTGTCCAGGGACGGGCAGGTATACTACGTCTACAACAGGGTGAGTGATATCGCGGATGTAGCGGGGAGAATACAAAAGCTGGTGCCGGATGCAGCCGTTTCCTTCGCGCATGGACAGATGAATGAACGCCAGCTGGAAAACATTATGTATGATTTTATTAACGGGGATATTGATGTTCTGGTGTCCACAACGATCATCGAGACCGGGCTGGACATCTCCAACGTGAACACCATGATAATCCACGATGCAGACCGCCTCGGGCTGTCACAGCTGTATCAGCTCCGGGGGCGTGTGGGCCGTTCCAGCCGGATGGCCTATGCATTTTTACTGTACAGAAGAGATAAGATGCTCAAAGAAGTGGCGGAAAAACGTCTTGCGGCCATCCGGGAATTTACGGATCTGGGATCCGGGTTTAAGATCGCGATGCGGGATCTGGAGATCCGCGGAGCAGGCAACCTTCTCGGGGAAGAGCAGCACGGCCATATGGAAGCCGTGGGGTACGACTTGTACTGCAAGATGCTCAATGAAGCGGTGAAGCAGCTTAAAGGCGAACTGGAGGAGGATGTCTACACCACAACGATGGACCTCAATATTGACGCTTATATTCCGGAATCCTATATCCCGAACGAATATCAGAAGCTGGATATATATAAACGGATTGCCAGCATTGAGAACGAGGAAGAGATGGATGATATGATAGAAGAGCTGATTGACCGTTTTGGGGATATTCCGAGGAAGGTGCAGCAGCTTTTGAATATTGCTGGTCTGAAAGCGCTTGCCCATTCCGCCTATGTGACCGCGGTCGAGCAGAAAGGGGATGCTTATCAGTTTACCATGTATGAAAAAGCGAAGGTACAGCCGCAGAAAATCCCGGGTCTTTTACAGGCCTATCATGGGAGCCTGGTGTTCAAAGCAGATACTCCTCCGTACTTCCTGTACCAGAAGAAAGGACGCAGCGGAAGGGAGAAGGATGAGAACGTGCTGGAATTGGTGAAAAAGGTGTTAAATGACATAAAAGGCTTGTTAGAATAA
PROTEIN sequence
Length: 1120
MQAFLAPLAELAEYKEIFGRRKKNSGVLQITGCVNSQKTHLMYALSDGCYYKIIAFSSDEKAKKAYEEYRFLDENVYLYPAKDLLFYHADIKGKYLIKQRMEVVRAILEAEEMESLDEGGITVITTMDAFLDGMPSLREIAKRRIHVEGTGTLDFIKLQEKLSAMGYEREVEIEGPGQYAVRGGILDVFPLTEELPVRIELWGDEVDSIRTFDVESQRSIENLDNVDIYPAAEFLGERGKSVSFLDYFPKEKSLLFLDEPLRLAEHADETAEEYLNSRKNREEAGMQEEEEPEIFSTKVIVDKMNQYYGIGLTTLESKCGGFHVRDTYSLQTKGVNPYNNSFEMLTRDLKRLKRSGYRVILLSGSRTRARRLAEDLRDYDLSSFYSEDMHREVQPGEIMAAYGHVAEGYEYPMLKFMVISETDIFGKQKRKKRRRTYEGQKIQNFSELKVGDYVVHENHGLGIYQGIEKIEVDKVTKDYMKISYAGGGALYILATQLDLIQKYAGADAKKPKLNKLGTSQWTKTKSQVRRAVRAVAKDLVELYAARQESQGFVYEPDTVWQKEFEEMFPFEETDDQLQAIADTKRDMESKKIMDRLICGDVGYGKTEIAIRAAFKAVQEGKQVVYLVPTTILAQQHYNTFVQRMRDFPVRVDLLCRFRTSAQQKKTVEDLKKGLVDIVIGTHRVLSKDVQFKDLGLLVIDEEQRFGVTHKEKIKKLRENVDVLTLTATPIPRTLHMSLIGIRDMSVLEEAPMDRMPIQTYVMEYNDEMVREAIERELSRDGQVYYVYNRVSDIADVAGRIQKLVPDAAVSFAHGQMNERQLENIMYDFINGDIDVLVSTTIIETGLDISNVNTMIIHDADRLGLSQLYQLRGRVGRSSRMAYAFLLYRRDKMLKEVAEKRLAAIREFTDLGSGFKIAMRDLEIRGAGNLLGEEQHGHMEAVGYDLYCKMLNEAVKQLKGELEEDVYTTTMDLNIDAYIPESYIPNEYQKLDIYKRIASIENEEEMDDMIEELIDRFGDIPRKVQQLLNIAGLKALAHSAYVTAVEQKGDAYQFTMYEKAKVQPQKIPGLLQAYHGSLVFKADTPPYFLYQKKGRSGREKDENVLELVKKVLNDIKGLLE*