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L1_007_122G1_scaffold_205

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_205_1
unknown

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3..110
DNA (108bp) protein (36aa)

This feature has no annotations

L1_007_122G1_scaffold_205_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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182..1015
DNA (834bp) protein (278aa)
Arylamine N-acetyltransferase (EC:2.3.1.118)
N-hydroxyarylamine O-acetyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0Z556_9CLOT
N-hydroxyarylamine O-acetyltransferase {ECO:0000313|EMBL:EGB90715.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1314..2951
DNA (1638bp) protein (546aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z559_9CLOT
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EGB90718.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L1_007_122G1_scaffold_205_4
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

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comp(3070..4062)
DNA (993bp) protein (331aa)
Putative uncharacterized protein id=3364514 bin=GWC2_Clostridiales_40_7 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
L1_007_122G1_scaffold_205_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4323..5618
DNA (1296bp) protein (432aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YVL8_9CLOT
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EGB94936.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter periplasmic subunit
L1_007_122G1_scaffold_205_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5683..6567
DNA (885bp) protein (295aa)
Sugar ABC transporter (Permease) n=1 Tax=Clostridium sp. D5 RepID=F0YVL9_9CLOT
Sugar ABC transporter (Permease) {ECO:0000313|EMBL:EGB94937.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter permease subunit
L1_007_122G1_scaffold_205_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6564..7385
DNA (822bp) protein (274aa)
Putative ABC transporter permease protein ORF2 n=1 Tax=Clostridium sp. D5 RepID=F0YVM0_9CLOT
Putative ABC transporter permease protein ORF2 {ECO:0000313|EMBL:EGB94938.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter periplasmic subunit-2
L1_007_122G1_scaffold_205_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7473..8285
DNA (813bp) protein (271aa)
Two-component response regulator YesN n=1 Tax=Clostridium sp. D5 RepID=F0YVM1_9CLOT
Two-component response regulator YesN {ECO:0000313|EMBL:EGB94939.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
response regulator
L1_007_122G1_scaffold_205_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8282..9958
DNA (1677bp) protein (559aa)
signal transduction protein (EC:2.7.13.3)
Putative HAMP domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YVM2_9CLOT
Putative HAMP domain protein {ECO:0000313|EMBL:EGB94940.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_10
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

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9963..11009
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00037B455E
hypothetical protein
Tax=Caldatribacterium saccharofermentans
L1_007_122G1_scaffold_205_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11011..12885
DNA (1875bp) protein (625aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63713.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
glycoside hydrolase
L1_007_122G1_scaffold_205_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12961..14019
DNA (1059bp) protein (353aa)
Putative methylcobamide:CoM methyltransferase isozyme M n=1 Tax=Clostridium sp. D5 RepID=F0YW85_9CLOT
Putative methylcobamide:CoM methyltransferase isozyme M {ECO:0000313|EMBL:EGB93923.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
uroporphyrinogen-III decarboxylase-like protein
L1_007_122G1_scaffold_205_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14712..16187
DNA (1476bp) protein (492aa)
arginine decarboxylase (EC:4.1.1.18 4.1.1.19)
Lysine decarboxylase n=1 Tax=Clostridium sp. D5 RepID=F0Z560_9CLOT
Lysine decarboxylase {ECO:0000313|EMBL:EGB90719.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16168..17022
DNA (855bp) protein (285aa)
speE; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Clostridium sp. D5 RepID=F0Z561_9CLOT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17023..18282
DNA (1260bp) protein (420aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0Z562_9CLOT
Saccharopine dehydrogenase {ECO:0000313|EMBL:EGB90721.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18422..19564
DNA (1143bp) protein (381aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=1 Tax=Clostridium sp. D5 RepID=F0Z563_9CLOT
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EGB90722.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19564..20673
DNA (1110bp) protein (370aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
agmatine deiminase (EC:3.5.3.12)
Putative agmatine deiminase n=1 Tax=Clostridium sp. D5 RepID=F0Z564_9CLOT
L1_007_122G1_scaffold_205_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20670..21536
DNA (867bp) protein (289aa)
N-carbamoylputrescine amidase n=1 Tax=Clostridium sp. D5 RepID=F0Z565_9CLOT
N-carbamoylputrescine amidase {ECO:0000313|EMBL:EGB90724.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
carbon-nitrogen hydrolase family protein
L1_007_122G1_scaffold_205_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22569..23348
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. D5 RepID=F0Z566_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
RNA polymerase, sigma subunit, RpsG/SigG
L1_007_122G1_scaffold_205_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23480..24133
DNA (654bp) protein (218aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Phosphoglycolate phosphatase n=1 Tax=Clostridium sp. D5 RepID=F0Z567_9CLOT
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EGB90726.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24152..24415
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z568_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB90727.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_205_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24455..24889)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z569_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB90728.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_205_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25063..25641
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium sp. D5 RepID=F0Z570_9CLOT
L1_007_122G1_scaffold_205_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25647..29006
DNA (3360bp) protein (1120aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. D5 RepID=F0Z571_9CLOT
L1_007_122G1_scaffold_205_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29055..30107
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z572_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB90731.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
PPIC-type PPIASE domain.
L1_007_122G1_scaffold_205_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31138..31698
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium sp. D5 RepID=F0Z574_9CLOT
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted membrane protein
L1_007_122G1_scaffold_205_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31700..32572)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z575_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB90734.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_205_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32569..33462)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z576_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB90735.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_122G1_scaffold_205_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33633..34664
DNA (1032bp) protein (344aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium sp. D5 RepID=F0Z577_9CLOT
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EGB90736.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_122G1_scaffold_205_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34664..35971
DNA (1308bp) protein (436aa)
Transporter protein, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family n=1 Tax=Clostridium sp. D5 RepID=F0Z578_9CLOT
Transporter protein, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family {ECO:0000313|EMBL:EGB90737.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Na+/H+-dicarboxylate symporters
Displaying items 1-30 of 54 in total

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