ggKbase home page

L1_007_365G1_scaffold_5513

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_5513_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..210)
-----------------
DNA (210bp)
protein (70aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCC7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES77421.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_5513_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(261..422)
-----------------
DNA (162bp)
protein (54aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GWV5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42297.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_5513_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(456..1124)
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57407.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L1_007_365G1_scaffold_5513_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1314..1958)
-----------------
DNA (645bp)
protein (215aa)
Shikimate kinase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4A5_9FIRM
Shikimate kinase.
Shikimate kinase {ECO:0000313|EMBL:CBK90245.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_365G1_scaffold_5513_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2671..2772)
-----------------
DNA (102bp)
protein (34aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GCM9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10119.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_007_365G1_scaffold_5513_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3448..4089)
-----------------
DNA (642bp)
protein (214aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L159_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13349.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_5513_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4173..4307)
-----------------
DNA (135bp)
protein (45aa)
Acetyltransferases (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSY1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG93729.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L1_007_365G1_scaffold_5513_8
unknown

Not on your lists

comp(4431..4640)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

L1_007_365G1_scaffold_5513_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4744..5775)
-----------------
DNA (1032bp)
protein (344aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L158_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13348.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_5513_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5871..7250)
-----------------
DNA (1380bp)
protein (460aa)
Putative efflux protein, MATE family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L157_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL13347.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_5513_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7284..7556)
-----------------
DNA (273bp)
protein (91aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L156_9FIRM
Protein of unknown function (DUF1667).
Uncharacterized protein {ECO:0000313|EMBL:CBL13346.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_5513_12
unknown

Not on your lists

comp(7560..7736)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

Displaying 12 items

View Taxonomy