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L1_007_365G1_scaffold_3615

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_3615_1
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1035)
DNA (1035bp) protein (345aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYH3_9BIFI
L1_007_365G1_scaffold_3615_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1373..1999
DNA (627bp) protein (209aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=T2I3Q1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK35840.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_365G1_scaffold_3615_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2140..2367
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP88_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ53483.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_365G1_scaffold_3615_4
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2394..3449)
DNA (1056bp) protein (352aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Ribosomal RNA small subunit methyltransferase I n=7 Tax=Bifidobacterium RepID=R5NHG4_9BIFI
hypothetical protein
L1_007_365G1_scaffold_3615_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3492..4037
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECY8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55882.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_365G1_scaffold_3615_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3895..5313)
DNA (1419bp) protein (473aa)
Possible symporter n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7T0_BIFLO
Sodium:solute symporter {ECO:0000313|EMBL:KEY20701.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
symporter
L1_007_365G1_scaffold_3615_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5374..6441
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G7T1_BIFLO
thiamine biosynthesis lipoprotein ApbE
Uncharacterized protein {ECO:0000313|EMBL:AAN24019.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_3615_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6594..8432)
DNA (1839bp) protein (613aa)
MdlB3 n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NGW0_9BIFI
MdlB3 {ECO:0000313|EMBL:CCY96541.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_365G1_scaffold_3615_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8647..10404)
DNA (1758bp) protein (586aa)
ABC transporter permease (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9Y3_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO96048.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_007_365G1_scaffold_3615_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10591..10785)
DNA (195bp) protein (65aa)
Transcriptional regulator, MarR family n=2 Tax=Bifidobacterium longum RepID=S3DLM9_BIFLN
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAJ67502.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Displaying 10 items

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