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L1_007_365G1_scaffold_1115

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1115_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..545)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BWC5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19080.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L1_007_365G1_scaffold_1115_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(665..2134)
DNA (1470bp) protein (490aa)
ATP-dependent Clp protease n=2 Tax=Lachnospiraceae RepID=F7JXG7_9FIRM
ATP-dependent Clp protease, ATP-binding subunit ClpX {ECO:0000313|EMBL:ETD19081.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L1_007_365G1_scaffold_1115_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2233..4200)
DNA (1968bp) protein (656aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=3 Tax=Lachnospiraceae RepID=A7AY00_RUMGN
L1_007_365G1_scaffold_1115_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4221..4979)
DNA (759bp) protein (253aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXZ9_RUMGN
L1_007_365G1_scaffold_1115_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4972..6132)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AXZ8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47788.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_1115_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6141..7553)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67955.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted membrane protein involved in D-alanine export
L1_007_365G1_scaffold_1115_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7574..8065)
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AXZ6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47790.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_1115_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8062..8820)
DNA (759bp) protein (253aa)
GDSL-like protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGN2_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CCZ67957.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Lysophospholipase L1 and related esterases
L1_007_365G1_scaffold_1115_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8889..9557)
DNA (669bp) protein (223aa)
RelA/SpoT domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQB1_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:CCZ67958.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
GTP pyrophosphokinase
L1_007_365G1_scaffold_1115_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9559..10188)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TX99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67959.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Transcriptional regulator
L1_007_365G1_scaffold_1115_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10337..10837
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AXZ2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47794.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_1115_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11086..13107)
DNA (2022bp) protein (674aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9W9_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCZ67961.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Molecular chaperone, HSP90 family
L1_007_365G1_scaffold_1115_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13356..13856
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family n=3 Tax=Lachnospiraceae RepID=A7AXY8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47796.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
C_GCAxxG_C_C family protein
L1_007_365G1_scaffold_1115_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13881..14819)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68216.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_007_365G1_scaffold_1115_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14875..16029)
DNA (1155bp) protein (385aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Peptidase, S41 family n=3 Tax=Lachnospiraceae RepID=A7AXY5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19095.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L1_007_365G1_scaffold_1115_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16105..17289)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68213.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Membrane-bound metallopeptidase
L1_007_365G1_scaffold_1115_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17298..18251)
DNA (954bp) protein (318aa)
Cell division protein FtsX n=2 Tax=Ruminococcus gnavus RepID=A7AXY3_RUMGN
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
cell division protein FtsX
L1_007_365G1_scaffold_1115_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18241..18927)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=3 Tax=Clostridiales RepID=A7AXY2_RUMGN
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCZ68211.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
cell division ATP-binding protein FtsE
L1_007_365G1_scaffold_1115_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19036..20127)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68210.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, CdaR family
L1_007_365G1_scaffold_1115_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20341..21018)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TXZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68209.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Teichoic acid biosynthesis proteins
L1_007_365G1_scaffold_1115_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21129..22724)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19101.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
BadF/BadG/BcrA/BcrD type ATPase
L1_007_365G1_scaffold_1115_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22953..23153)
DNA (201bp) protein (67aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AXX6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19102.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Small, acid-soluble spore proteins, alpha/beta type.
L1_007_365G1_scaffold_1115_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23213..23404)
DNA (192bp) protein (64aa)
PspC domain protein n=4 Tax=Clostridiales RepID=A7AXX5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19103.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
phage shock protein C, PspC
L1_007_365G1_scaffold_1115_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23409..23642)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BVF7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47809.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Protein of unknown function (DUF2807).
L1_007_365G1_scaffold_1115_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23639..24088)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7AXX4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79371.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L1_007_365G1_scaffold_1115_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24089..24805)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXX3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79370.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted membrane protein
L1_007_365G1_scaffold_1115_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24802..25125)
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR family n=4 Tax=Clostridiales RepID=A7AXX2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47811.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, PadR family
L1_007_365G1_scaffold_1115_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25295..25561)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UH91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68202.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted membrane protein
L1_007_365G1_scaffold_1115_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25562..29146)
DNA (3585bp) protein (1195aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXX0_RUMGN
recombination helicase AddA, Firmicutes type
L1_007_365G1_scaffold_1115_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29143..32415)
DNA (3273bp) protein (1091aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68200.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ATP-dependent nuclease subunit B
Displaying items 1-30 of 39 in total

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