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L1_007_365G1_scaffold_1178

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1178_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(314..607)
-----------------
DNA (294bp)
protein (98aa)
Transposase IS3/IS911 family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWX9_BIFLJ
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ADH01385.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_365G1_scaffold_1178_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

978..1199
-----------------
DNA (222bp)
protein (74aa)
Transposase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I4X3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI79728.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_365G1_scaffold_1178_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1218..1814
-----------------
DNA (597bp)
protein (199aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRY5_BIFL1
Proline symporter {ECO:0000313|EMBL:KFI77763.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
hypothetical protein
L1_007_365G1_scaffold_1178_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2487..3689)
-----------------
DNA (1203bp)
protein (401aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7N0_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24071.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1178_5
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4153..5058)
-----------------
DNA (906bp)
protein (302aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7M8_BIFLO
rmlA; glucose-1-phosphate thymidylyltransferase
L1_007_365G1_scaffold_1178_6
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5149..6591)
-----------------
DNA (1443bp)
protein (481aa)
Fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis {ECO:0000313|EMBL:KFI67509.1}; EC=5.1.3.13 {ECO:0000313|EMBL:KFI67509.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7M7_BIFLO
fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis
L1_007_365G1_scaffold_1178_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6595..7437)
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3E1H6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:BAP83074.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L1_007_365G1_scaffold_1178_8
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7528..8550)
-----------------
DNA (1023bp)
protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3K5_BIFAA
DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis
L1_007_365G1_scaffold_1178_9
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8583..8780
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI67511.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L1_007_365G1_scaffold_1178_10
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8777..9640)
-----------------
DNA (864bp)
protein (288aa)
Glycoside transferase family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISU2_9FIRM
Glycosyltransferase {ECO:0000313|EMBL:KFI67512.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
core-2/I-Branching enzyme family protein
L1_007_365G1_scaffold_1178_11
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9669..10664)
-----------------
DNA (996bp)
protein (332aa)
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFQ9_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29746.1}; Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:KFI67513.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
polysaccharide pyruvyl transferase
L1_007_365G1_scaffold_1178_12
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10845..12317)
-----------------
DNA (1473bp)
protein (491aa)
Polysaccharide biosynthesis protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E892_BIFLI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29747.1}; Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KFI67514.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
polysaccharide biosynthesis protein
L1_007_365G1_scaffold_1178_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12328..13527)
-----------------
DNA (1200bp)
protein (400aa)
O-antigen polymerase n=2 Tax=Clostridium RepID=A7VNX8_9CLOT
O-antigen polymerase {ECO:0000313|EMBL:EDO62959.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Lipid A core-O-antigen ligase and related enzymes
L1_007_365G1_scaffold_1178_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13529..14524)
-----------------
DNA (996bp)
protein (332aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29749.1}; Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:KFI67516.1}; EC=2.4.1.293 {ECO:0000313|EMBL:KFI67516.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Glycosyltransferase n=1 Tax=Bacillus cereus NVH0597-99 RepID=B3Z5I4_BACCE
glycosyl transferase family 2
L1_007_365G1_scaffold_1178_15
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14634..15329)
-----------------
DNA (696bp)
protein (232aa)
Putative acetyl transferase {ECO:0000313|EMBL:KFI85164.1}; EC=2.3.1.79 {ECO:0000313|EMBL:KFI85164.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Uncharacterized protein n=1 Tax=Enterococcus flavescens ATCC 49996 RepID=R2S9S8_ENTCA
acetyltransferase (isoleucine patch superfamily)
L1_007_365G1_scaffold_1178_16
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15334..15765)
-----------------
DNA (432bp)
protein (144aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29750.1}; Group 1 glycosyl transferase {ECO:0000313|EMBL:KFI67517.1}; EC=2.4.1.283 {ECO:0000313|EMBL:KFI67517.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HG40_9CLOT
group 1 glycosyl transferase
L1_007_365G1_scaffold_1178_17
unknown

Not on your lists

comp(15765..15908)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

L1_007_365G1_scaffold_1178_18
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16532..17725)
-----------------
DNA (1194bp)
protein (398aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4N0_9BIFI
Rhamnosyltransferase {ECO:0000313|EMBL:KFI67518.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
cpsF; rhamnosyltransferase
L1_007_365G1_scaffold_1178_19
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18395..18943
-----------------
DNA (549bp)
protein (183aa)
Putative transcriptional regulator {ECO:0000313|EMBL:KFI91555.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI91555.1};; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
Putative transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUN3_BIFLS
putative transcriptional regulator
L1_007_365G1_scaffold_1178_20
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19108..20337
-----------------
DNA (1230bp)
protein (410aa)
Transposase and inactivated derivatives n=2 Tax=Bifidobacterium RepID=D6DCM4_BIFLN
Transposase {ECO:0000313|EMBL:KFI91761.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
Transposase and inactivated derivatives
L1_007_365G1_scaffold_1178_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20448..20603)
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJ36_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76753.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_365G1_scaffold_1178_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20545..21795)
-----------------
DNA (1251bp)
protein (417aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A3F0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76752.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative membrane spanning protein
L1_007_365G1_scaffold_1178_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22034..22639)
-----------------
DNA (606bp)
protein (202aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:KFI72080.1}; EC=3.1.3.48 {ECO:0000313|EMBL:KFI72080.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Protein-tyrosine-phosphatase n=2 Tax=Bifidobacterium longum RepID=D6D9V7_BIFLN
L1_007_365G1_scaffold_1178_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22825..24585
-----------------
DNA (1761bp)
protein (587aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMN5_BIFBR
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:KEY27460.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Undecaprenyl-phosphate galactosephosphotransferase
L1_007_365G1_scaffold_1178_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24706..25608)
-----------------
DNA (903bp)
protein (301aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1J7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87967.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_007_365G1_scaffold_1178_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25760..26152)
-----------------
DNA (393bp)
protein (131aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1V3_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18706.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_365G1_scaffold_1178_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26618..27961
-----------------
DNA (1344bp)
protein (448aa)
Putative permease n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DTH5_BIFLD
permease
Putative permease {ECO:0000313|EMBL:ACD98444.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1178_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28060..29427)
-----------------
DNA (1368bp)
protein (456aa)
H(+)-stimulated manganese uptake system protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDH7_9BIFI
Manganese transporter {ECO:0000313|EMBL:KHD95097.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
mntH; NRAMP family Mn2+ and Fe2+ transporter
L1_007_365G1_scaffold_1178_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29685..31055
-----------------
DNA (1371bp)
protein (457aa)
Predicted ATPase n=4 Tax=Bifidobacterium longum RepID=B9TTI9_BIFLN
ATPase AAA {ECO:0000313|EMBL:KEY33112.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
AAA+ superfamily ATPase
L1_007_365G1_scaffold_1178_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31059..31802)
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=B3DTH8_BIFLD
hypothetical protein
PF07510 family protein {ECO:0000313|EMBL:EIJ21559.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Displaying items 1-30 of 33 in total

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