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L1_007_365G1_scaffold_1240

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1240_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

L1_007_365G1_scaffold_1240_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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352..1113
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MMH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71851.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_1240_3
unknown

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comp(1700..1951)
DNA (252bp) protein (84aa)

This feature has no annotations

L1_007_365G1_scaffold_1240_4
unknown

Not on your lists

2120..2437
DNA (318bp) protein (106aa)

This feature has no annotations

L1_007_365G1_scaffold_1240_5
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2495..2764
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AG57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ28392.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L1_007_365G1_scaffold_1240_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3093..5006)
DNA (1914bp) protein (638aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH61_9FIRM
L1_007_365G1_scaffold_1240_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5037..7547)
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YS62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24321.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_007_365G1_scaffold_1240_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7676..9031)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77592.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_1240_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9042..11327)
DNA (2286bp) protein (762aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77593.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_1240_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11386..12768)
DNA (1383bp) protein (461aa)
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPA5_9FIRM
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase {ECO:0000313|EMBL:CCZ77594.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_007_365G1_scaffold_1240_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12775..13464)
DNA (690bp) protein (230aa)
DNA-binding response regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHW1_9FIRM
DNA-binding response regulator {ECO:0000313|EMBL:CCZ77595.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_1240_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13445..14368)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77596.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_1240_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14552..15829
DNA (1278bp) protein (426aa)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA85_9FIRM
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB {ECO:0000313|EMBL:CCZ77597.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L1_007_365G1_scaffold_1240_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15823..17538
DNA (1716bp) protein (572aa)
CoA-substrate-specific enzyme activase putative n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH68_9FIRM
CoA-substrate-specific enzyme activase putative {ECO:0000313|EMBL:CCZ77598.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
CoA-substrate-specific enzyme activase, putative
L1_007_365G1_scaffold_1240_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17873..18838
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79004.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_1240_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18898..20385)
DNA (1488bp) protein (496aa)
Fla3 flagellin (Fragment) n=1 Tax=Roseburia intestinalis RepID=A7IZH7_9FIRM
Fla3 flagellin {ECO:0000313|EMBL:ABI48295.1}; Flags: Fragment;; TaxID=166486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis.;"
Flagellin and related hook-associated proteins
Displaying 16 items

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