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L1_007_365G1_scaffold_1293

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1293_1
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1194)
DNA (1194bp) protein (398aa)
Transport protein n=9 Tax=Bifidobacterium RepID=F8ARQ2_BIFLN
transporter
Putative transport protein {ECO:0000313|EMBL:CCY95415.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1293_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1370..2071)
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDD0_BIFLI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAP84355.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_365G1_scaffold_1293_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2267..3715)
DNA (1449bp) protein (483aa)
Maf-like protein n=2 Tax=Bifidobacterium RepID=E5XZF8_9BIFI
Septum formation protein Maf {ECO:0000313|EMBL:KHD95847.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L1_007_365G1_scaffold_1293_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3727..6114)
DNA (2388bp) protein (796aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Homoserine dehydrogenase n=3 Tax=Bifidobacterium RepID=V6Y0W3_BIFLN
thrA; homoserine dehydrogenase
L1_007_365G1_scaffold_1293_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6274..7866)
DNA (1593bp) protein (531aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Diaminopimelate decarboxylase n=3 Tax=Bifidobacterium longum RepID=Q8G4V1_BIFLO
lysA; diaminopimelate decarboxylase
L1_007_365G1_scaffold_1293_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7869..9731)
DNA (1863bp) protein (621aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Arginine--tRNA ligase n=8 Tax=Bifidobacterium RepID=D6DCE3_BIFLN
argS; args
L1_007_365G1_scaffold_1293_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9945..10610
DNA (666bp) protein (222aa)
AcrR-type transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2J6_BIFLM
Putative transcriptional regulator {ECO:0000313|EMBL:BAP84364.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
acrr-type transcriptional regulator
L1_007_365G1_scaffold_1293_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10607..11884
DNA (1278bp) protein (426aa)
Major Facilitator Superfamily n=3 Tax=Bifidobacterium RepID=D6DCE5_BIFLN
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CCY95422.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1293_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11971..12903
DNA (933bp) protein (311aa)
LysR substrate-binding domain protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BD94_BIFLN
LysR substrate-binding domain protein {ECO:0000313|EMBL:EIJ29337.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
LysR-type transcriptional regulator
L1_007_365G1_scaffold_1293_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13003..14250
DNA (1248bp) protein (416aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities n=8 Tax=Bifidobacterium RepID=D6DCE7_BIFLN
aminotransferase
Probable aminotransferase {ECO:0000313|EMBL:AAN25069.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1293_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14299..15624)
DNA (1326bp) protein (442aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
UDP-N-acetylglucosamine enolpyruvyl transferase n=14 Tax=Bifidobacterium RepID=B3DPI6_BIFLD
murA; mura
L1_007_365G1_scaffold_1293_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15874..17220
DNA (1347bp) protein (449aa)
NADH oxidase {ECO:0000313|EMBL:EEQ56038.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EEQ56038.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Uncharacterized NAD(FAD)-dependent dehydrogenases n=15 Tax=Bifidobacterium RepID=D6DCE8_BIFLN
hcaD; hcad
L1_007_365G1_scaffold_1293_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17427..18542)
DNA (1116bp) protein (372aa)
Dihydroorotate dehydrogenase n=2 Tax=Bifidobacterium longum RepID=S3E1S4_BIFLN
dihydroorotate dehydrogenase
Putative dihydroorotate dehydrogenase {ECO:0000313|EMBL:BAJ67432.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_365G1_scaffold_1293_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19059..19751)
DNA (693bp) protein (231aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
3-isopropylmalate dehydratase small subunit n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWB7_BIFLN
isopropylmalate isomerase small subunit
L1_007_365G1_scaffold_1293_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19837..21240)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
3-isopropylmalate dehydratase large subunit n=3 Tax=Bifidobacterium RepID=I3AWB6_BIFLN
isopropylmalate isomerase large subunit
L1_007_365G1_scaffold_1293_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21534..22334
DNA (801bp) protein (267aa)
IclR-type transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=B3DPI1_BIFLD
transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:KEY32235.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_365G1_scaffold_1293_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22483..23748)
DNA (1266bp) protein (422aa)
Calcineurin-like phosphoesterase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I3A4_BIFLN
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:CCK35777.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
phosphoesterase
L1_007_365G1_scaffold_1293_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24253..24363
DNA (111bp) protein (37aa)
ppk; Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Polyphosphate kinase n=4 Tax=Bifidobacterium breve RepID=F6C8D8_BIFBA
L1_007_365G1_scaffold_1293_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24390..25469
DNA (1080bp) protein (360aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Polyphosphate kinase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPH9_BIFLD
polyphosphate kinase
L1_007_365G1_scaffold_1293_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25439..26071
DNA (633bp) protein (211aa)
ppk; Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Polyphosphate kinase n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2I5_BIFLM
Displaying 20 items

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