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L1_007_365G1_scaffold_1430

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1430_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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201..1190
DNA (990bp) protein (330aa)
Predicted dehydrogenases and related proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBS1_9FIRM
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CCZ78212.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative oxidoreductase
L1_007_365G1_scaffold_1430_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1272..2096)
DNA (825bp) protein (275aa)
Transcriptional regulators n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIV9_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CCZ78213.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L1_007_365G1_scaffold_1430_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2386..3129
DNA (744bp) protein (248aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
glucosamine-6-phosphate deaminase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000316A03A
L1_007_365G1_scaffold_1430_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3145..4245
DNA (1101bp) protein (367aa)
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD31_9FIRM
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:CCZ78677.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_1430_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4246..7299)
DNA (3054bp) protein (1018aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK52_9FIRM
L1_007_365G1_scaffold_1430_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7361..8191)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78679.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_1430_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8184..9077)
DNA (894bp) protein (298aa)
ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKX7_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCZ78680.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
lactose transport system (permease)
L1_007_365G1_scaffold_1430_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9172..10506)
DNA (1335bp) protein (445aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5F7_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ78681.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_1430_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10826..11335)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78682.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_1430_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11342..12283)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78683.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L1_007_365G1_scaffold_1430_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12283..13398)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78684.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphotransferase enzyme family.
L1_007_365G1_scaffold_1430_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13563..14405
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78685.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, AraC/XylS family protein
L1_007_365G1_scaffold_1430_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14402..16558)
DNA (2157bp) protein (719aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JXG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47751.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR02336
Displaying 13 items

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