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L1_007_365G1_scaffold_1466

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1466_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..418)
DNA (417bp) protein (139aa)
Predicted integral membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Q8_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL00207.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(575..943)
DNA (369bp) protein (123aa)
Putative PTS system N-acetylglucosamine-specific IIBC component n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R7Y6_9FIRM
Putative PTS system N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:CDC30557.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L1_007_365G1_scaffold_1466_3
unknown

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comp(963..2048)
DNA (1086bp) protein (362aa)

This feature has no annotations

L1_007_365G1_scaffold_1466_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2147..2803)
DNA (657bp) protein (219aa)
Predicted phosphatase/phosphohexomutase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K246_9FIRM
Predicted phosphatase/phosphohexomutase
Predicted phosphatase/phosphohexomutase {ECO:0000313|EMBL:CBL00345.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2822..3649)
DNA (828bp) protein (276aa)
PTS system IID component, Man family (TC 4.A.6) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K245_9FIRM
PTS system IID component, Man family (TC 4.A.6)
PTS system IID component, Man family (TC 4.A.6) {ECO:0000313|EMBL:CBL00344.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3639..4457)
DNA (819bp) protein (273aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K244_9FIRM
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC {ECO:0000313|EMBL:CBL00343.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4501..4977)
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:CBL00342.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL00342.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K243_9FIRM
L1_007_365G1_scaffold_1466_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5207..6406
DNA (1200bp) protein (400aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K242_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL00341.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6419..7390
DNA (972bp) protein (324aa)
Predicted dehydrogenases and related proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K241_9FIRM
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBL00340.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7552..8403
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolases (EC:4.1.2.40 4.1.2.13)
Ketose-bisphosphate aldolases {ECO:0000313|EMBL:CBL00339.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL00339.1};; EC=4.1.2.40 {ECO:0000313|EMBL:CBL00339.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ketose-bisphosphate aldolases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K240_9FIRM
L1_007_365G1_scaffold_1466_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8741..9025)
DNA (285bp) protein (95aa)
Preprotein translocase, YajC subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K239_9FIRM
preprotein translocase, YajC subunit
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:CBL00338.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9029..9472)
DNA (444bp) protein (148aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:CBL00337.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL00337.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K238_9FIRM
L1_007_365G1_scaffold_1466_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9498..10676)
DNA (1179bp) protein (393aa)
galactosamine 6-phosphate isomerase AgaS (EC:5.-.-.-)
Galactosamine 6-phosphate isomerase AgaS {ECO:0000313|EMBL:CBL00336.1}; EC=5.-.-.- {ECO:0000313|EMBL:CBL00336.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Galactosamine 6-phosphate isomerase AgaS n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K237_9FIRM
L1_007_365G1_scaffold_1466_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10977..12116
DNA (1140bp) protein (380aa)
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994, ECO:0000313|EMBL:CBL00335.1};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K236_9FIRM
L1_007_365G1_scaffold_1466_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12147..13436
DNA (1290bp) protein (430aa)
tagatose-bisphosphate aldolase noncatalytic subunit (EC:4.1.2.40)
Tagatose-bisphosphate aldolase noncatalytic subunit {ECO:0000313|EMBL:CBL00334.1}; EC=4.1.2.40 {ECO:0000313|EMBL:CBL00334.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Tagatose-bisphosphate aldolase noncatalytic subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K235_9FIRM
L1_007_365G1_scaffold_1466_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13483..13740
DNA (258bp) protein (86aa)
Phosphotransferase System HPr (HPr) Family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K234_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL00333.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13838..14110)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K233_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00332.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_18
unknown

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14318..14503
DNA (186bp) protein (62aa)

This feature has no annotations

L1_007_365G1_scaffold_1466_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14563..15504
DNA (942bp) protein (314aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Tagatose-6-phosphate kinase n=3 Tax=Clostridium RepID=E9SIF3_CLOSY
fructose-1-phosphate kinase
L1_007_365G1_scaffold_1466_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15800..16297)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S5Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP23170.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
YolD-like protein.
L1_007_365G1_scaffold_1466_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16376..17740)
DNA (1365bp) protein (455aa)
ImpB/MucB/SamB family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8R4_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EDP22396.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L1_007_365G1_scaffold_1466_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17760..18047)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S5Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP23172.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_365G1_scaffold_1466_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18389..18907)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22894.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_365G1_scaffold_1466_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19034..19372)
DNA (339bp) protein (113aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6U2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDP22893.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_365G1_scaffold_1466_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19531..20922)
DNA (1392bp) protein (464aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4M6_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBK98469.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20968..21225)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07878.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_365G1_scaffold_1466_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21234..21509)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4M7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98470.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_1466_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21614..21946)
DNA (333bp) protein (111aa)
Bacterial mobilisation protein (MobC) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBA6_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilisation protein (MobC) {ECO:0000313|EMBL:CBL02119.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_1466_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21943..29136)
DNA (7194bp) protein (2398aa)
SNF2 family N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3N0_9FIRM
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EEU97464.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SNF2-like protein
L1_007_365G1_scaffold_1466_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29218..29610)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBB5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02128.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying items 1-30 of 38 in total

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