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L1_007_365G1_scaffold_1524

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1524_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..192
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRD8_9BIFI
Putative cell surface protein {ECO:0000313|EMBL:BAR04434.1}; Uncharacterized protein {ECO:0000313|EMBL:EEG71232.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
putative secreted protein
L1_007_365G1_scaffold_1524_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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203..652
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRD7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71231.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_365G1_scaffold_1524_3
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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724..1050
-----------------
DNA (327bp)
protein (109aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6PAP1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15606.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_365G1_scaffold_1524_4
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1128..2486
-----------------
DNA (1359bp)
protein (453aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NWQ0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15605.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
chloride channel protein
L1_007_365G1_scaffold_1524_5
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2564..3658
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRD4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15604.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycine-rich cell wall protein
L1_007_365G1_scaffold_1524_6
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3688..5139)
-----------------
DNA (1452bp)
protein (484aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTW2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15603.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
histidine kinase
L1_007_365G1_scaffold_1524_7
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5136..5852)
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q0W8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15602.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
LytTR family transcriptional regulator
L1_007_365G1_scaffold_1524_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6172..7299
-----------------
DNA (1128bp)
protein (376aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRD1_9BIFI
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF27923.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sugar ABC transporter ATP-binding protein
L1_007_365G1_scaffold_1524_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7663..9072
-----------------
DNA (1410bp)
protein (470aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRD0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16172.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
lipopolysaccharide kinase
L1_007_365G1_scaffold_1524_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9459..10460)
-----------------
DNA (1002bp)
protein (334aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bifidobacterium RepID=C0BRC9_9BIFI
RNA methyltransferase {ECO:0000313|EMBL:BAR04426.1}; RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEG71223.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
RNA methyltransferase
L1_007_365G1_scaffold_1524_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10576..11850
-----------------
DNA (1275bp)
protein (425aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRC8_9BIFI
Permease {ECO:0000313|EMBL:KEF27926.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
conserved hypothetical transport protein
L1_007_365G1_scaffold_1524_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11985..12107)
-----------------
DNA (123bp)
protein (41aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRC7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71221.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_365G1_scaffold_1524_13
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12340..12669)
-----------------
DNA (330bp)
protein (110aa)
Toxin-antitoxin system, toxin component, RelE family n=2 Tax=Bifidobacterium RepID=C0BRC5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16176.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_365G1_scaffold_1524_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12666..12983)
-----------------
DNA (318bp)
protein (106aa)
Prevent-host-death family protein n=2 Tax=Bifidobacterium RepID=C0BRC4_9BIFI
Prevent-host-death family protein {ECO:0000313|EMBL:EEG71218.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04423.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_007_365G1_scaffold_1524_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13171..14079)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVM4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16178.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_365G1_scaffold_1524_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14404..17334)
-----------------
DNA (2931bp)
protein (977aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Beta galactosidase small chain n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRC1_9BIFI
beta-galactosidase
L1_007_365G1_scaffold_1524_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17741..20737
-----------------
DNA (2997bp)
protein (999aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PZG3_9BIFI
Haloacid dehalogenase {ECO:0000313|EMBL:KEF27931.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
haloacid dehalogenase
L1_007_365G1_scaffold_1524_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20916..21377)
-----------------
DNA (462bp)
protein (154aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bifidobacterium RepID=C0BRB8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15081.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
putative transcriptional regulator
Displaying 18 items

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